RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 COMMD3Q9UBI1 195 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 FBXW2Q9UKT8 454 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 DOCK6Q96HP0 2047 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 FAM240BA0A1B0GVZ2 78 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 ORC5O43913 435 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 RRAS2P62070 204 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 FABP5Q01469 135 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TAP2Q03519 686 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 UBE3AQ05086 875 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MINDY4Q4G0A6 757 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 C1orf94Q6P1W5 598 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MZT2AQ6P582 158 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 ZER1Q7Z7L7 766 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MRGPREQ86SM8 312 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 UBE2J2Q8N2K1 259 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 FAM109AQ8N4B1 249 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TMEM145Q8NBT3 493 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 OR4K5Q8NGD3 323 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 HCAR2Q8TDS4 363 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SETD7Q8WTS6 366 aaKnown RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 RNFT2Q96EX2 444 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 ARHGAP9Q9BRR9 750 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TRIM45Q9H8W5 580 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SLAMF7Q9NQ25 335 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 STMN3Q9NZ72 180 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 CARD8Q9Y2G2 431 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TMA7Q9Y2S6 64 aaKnown RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 OBSL1O75147 1896 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 CASKO14936 926 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 SH3BP5O60239 455 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 NUDT1P36639 197 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 FRKP42685 505 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-202ENST00000413219 RECQLP46063 649 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-202ENST00000413219 OR3A3P47888 321 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 MAB21L1Q13394 359 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 TSTA3Q13630 321 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-202ENST00000413219 SNAPC1Q16533 368 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 TCTN1Q2MV58 587 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 WSCD2Q2TBF2 565 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 OR2G6Q5TZ20 316 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 TBC1D19Q8N5T2 526 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 SMPDL3AQ92484 453 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 RAB8BQ92930 207 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 ZNF689Q96CS4 500 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-202ENST00000413219 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 ZNF764Q96H86 408 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-202ENST00000413219 ATF6BQ99941 703 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 FNDC11Q9BVV2 318 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 ADAM30Q9UKF2 790 aa16.67■□□□□ 0.26
SDCBP-202ENST00000413219 A0A0X1KG70 313 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 OR2B3O76000 313 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SOD1P00441 154 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 EPHX1P07099 455 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 ELNP15502 786 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 TIMP2P16035 220 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 PBLDP30039 288 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 MEF2AQ02078 507 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 PIN1Q13526 163 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SPDYE7PQ495Y7 208 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 ZNF485Q8NCK3 441 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SUN5Q8TC36 379 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 GATAD2BQ8WXI9 593 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 QRFPRQ96P65 431 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 TM9SF2Q99805 663 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 PRRG3Q9BZD7 231 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 MKRN2Q9H000 416 aaKnown RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 RERGLQ9H628 205 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SIRT3Q9NTG7 399 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 TAS2R7Q9NYW3 318 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 A0A1W2PQ45 241 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 A0A1W2PQY0 241 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SLC28A2O43868 658 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 HPGDSO60760 199 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 CHRM5P08912 532 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 GABRR2P28476 465 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 MTNR1AP48039 350 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 PCBP4P57723 403 aaKnown RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 ABATP80404 500 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 BTBD16Q32M84 506 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 LYPD8Q6UX82 237 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 DPPA4Q7L190 304 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 KRT78Q8N1N4 520 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 WFDC6Q9BQY6 131 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SORBS1Q9BX66 1292 aaKnown RBP16.66■□□□□ 0.26
SDCBP-202ENST00000413219 B3GAT2Q9NPZ5 323 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 MAN2C1Q9NTJ4 1040 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SPG21Q9NZD8 308 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 NLKQ9UBE8 527 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 P2RX2Q9UBL9 471 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 MAFFQ9ULX9 164 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 SLC9A8Q9Y2E8 581 aa16.66■□□□□ 0.26
SDCBP-202ENST00000413219 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-202ENST00000413219 KDM4EB2RXH2 506 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-202ENST00000413219 PI15O43692 258 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 SLC19A2O60779 497 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 B4GALT2O60909 372 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 LIMS3P0CW19 117 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms