RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NKX1-2Q9UD57 310 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 FAF1Q9UNN5 650 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 MMACHCQ9Y4U1 282 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PCDHGA1Q9Y5H4 931 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 UNC13CQ8NB66 2214 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MUC6Q6W4X9 2439 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 FER1L5A0AVI2 2057 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 IGLV3-12A0A075B6K2 115 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 A0A087WV62 115 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 MYOCOSA0A1B0GUC4 107 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 OR2W5A6NFC9 320 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 B4E171 279 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 HMGN4O00479 90 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 POLR1CO15160 346 aaPredicted RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 ASNA1O43681 348 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 OR10H2O60403 315 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PLOD3O60568 738 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CPNE3O75131 537 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 GMNNO75496 209 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CREG1O75629 220 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 BMP10O95393 424 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SERPINA1P01009 418 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 HMGN2P05204 90 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 BCHEP06276 602 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 GPIP06744 558 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 HBQ1P09105 142 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CT62P0C5K7 136 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CCL4P13236 92 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ANPEPP15144 967 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SLC7A1P30825 629 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 RORAP35398 523 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 TSPAN7P41732 249 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 STT3AP46977 705 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PRIM2P49643 509 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ANXA11P50995 505 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 EFNA3P52797 238 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CRYBA2P53672 197 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 MAPK10P53779 464 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PRKAG1P54619 331 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CLDN6P56747 220 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 TXNL4AP83876 142 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 E2F1Q01094 437 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 MC2RQ01718 297 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 RHAGQ02094 409 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 EEF1A2Q05639 463 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 MGAT2Q10469 447 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SCARB2Q14108 478 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SERTAD2Q14140 314 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 LASP1Q14847 261 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 ZNF630Q2M218 657 aaPredicted RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 MINDY4Q4G0A6 757 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 NKAIN1Q4KMZ8 207 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 LRRC23Q53EV4 343 aaPredicted RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 TRMT12Q53H54 448 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 CCDC157Q569K6 752 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 STPG1Q5TH74 334 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 IRAK1BP1Q5VVH5 260 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 MFSD12Q6NUT3 480 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 RNF111Q6ZNA4 994 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 DGAT2L6Q6ZPD8 337 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 GLRX5Q86SX6 157 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SLC30A8Q8IWU4 369 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 GALNT12Q8IXK2 581 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 LGI4Q8N135 537 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 VWA5B2Q8N398 1253 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 FAM86B1Q8N7N1 296 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SIMC1Q8NDZ2 872 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 OR5D16Q8NGK9 328 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 NFKBIDQ8NI38 313 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 FBXO30Q8TB52 745 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 FAM110BQ8TC76 370 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 MIPOL1Q8TD10 442 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 NETO1Q8TDF5 533 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CANT1Q8WVQ1 401 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 TSLPQ969D9 159 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PMEPA1Q969W9 287 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 SLCO4A1Q96BD0 722 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PPWD1Q96BP3 646 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 CTHRC1Q96CG8 243 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 DGAT2Q96PD7 388 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CMKLR1Q99788 373 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 PELOQ9BRX2 385 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 YIPF2Q9BWQ6 316 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ALOXE3Q9BYJ1 711 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ASPSCR1Q9BZE9 553 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 OR51I1Q9H343 314 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 EQTNQ9NQ60 294 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 NECTIN3Q9NQS3 549 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 FBXO8Q9NRD0 319 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 DCAF13Q9NV06 445 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 OLAHQ9NV23 265 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 C14orf105Q9NVL8 296 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 THUMPD1Q9NXG2 353 aaKnown RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 AKAP7Q9P0M2 348 aaPredicted RBP6.22□□□□□ -1.41
VPS41-204ENST00000413141 P2RX2Q9UBL9 471 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ANAPC2Q9UJX6 822 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 ANGPTL2Q9UKU9 493 aa6.22□□□□□ -1.41
VPS41-204ENST00000413141 C19orf53Q9UNZ5 99 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms