RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 ACSM2BQ68CK6 577 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 FAM111BQ6SJ93 734 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 OPN5Q6U736 354 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 SLC15A4Q8N697 577 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 C17orf47Q8NEP4 570 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 PAQR8Q8TEZ7 354 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 C16orf78Q8WTQ4 265 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 GAL3ST4Q96RP7 486 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 OR10A5Q9H207 317 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.04■□□□□ 0.167e-7■■■■□ 26.2
HSPG2-204ENST00000412328 NPIPA1Q9UND3 350 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 ERVK-11Q9UQG0 969 aa16.04■□□□□ 0.16
HSPG2-204ENST00000412328 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 GOLGA6L10A6NI86 522 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 TMEM233B4DJY2 109 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 KLRC4-KLRK1H3BQV0 150 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 DYRK3O43781 588 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 NPHS1O60500 1241 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 SLC19A2O60779 497 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 ERAL1O75616 437 aaKnown RBP16.03■□□□□ 0.16
HSPG2-204ENST00000412328 FEN1P39748 380 aaKnown RBP16.03■□□□□ 0.16
HSPG2-204ENST00000412328 GSTM5P46439 218 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 ZNF763Q0D2J5 394 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 NTRK2Q16620 822 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 UGT3A2Q3SY77 523 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 KRTCAP3Q53RY4 240 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 CFAP157Q5JU67 520 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 SLC29A4Q7RTT9 530 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 LRRC25Q8N386 305 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-204ENST00000412328 VWA5B2Q8N398 1253 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 SLC22A8Q8TCC7 542 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 ZNF675Q8TD23 568 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 SGCZQ96LD1 299 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 FAIM2Q9BWQ8 316 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 TTTY12Q9BZ98 90 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 RYDENQ9NUL5 291 aaKnown RBP16.03■□□□□ 0.16
HSPG2-204ENST00000412328 EHD3Q9NZN3 535 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 PLEKHB1Q9UF11 243 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-204ENST00000412328 UTS2RQ9UKP6 389 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 DNAJC15Q9Y5T4 150 aa16.03■□□□□ 0.16
HSPG2-204ENST00000412328 NAV2Q8IVL1 2488 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 G3V3Y1 287 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 AZIN1O14977 448 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 ASNA1O43681 348 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 HS6ST1O60243 411 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 DRD2P14416 443 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 CSNK2A2P19784 350 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-204ENST00000412328 NT5EP21589 574 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 ALDH9A1P49189 494 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 MRPS35P82673 323 aaKnown RBP16.02■□□□□ 0.16
HSPG2-204ENST00000412328 C3AR1Q16581 482 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 HYAL4Q2M3T9 481 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 HIST2H2BCQ6DN03 193 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 FAM71E1Q6IPT2 247 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 BNC2Q6ZN30 1099 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-204ENST00000412328 Q6ZSR9 355 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 ZCCHC23Q6ZST2 131 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 FJX1Q86VR8 437 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 FBXW8Q8N3Y1 598 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 OR7G1Q8NGA0 311 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 OR10G3Q8NGC4 313 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 OR52N2Q8NGI0 321 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 TP53INP1Q96A56 240 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 ITPAQ9BY32 194 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 MYNNQ9NPC7 610 aa16.02■□□□□ 0.16
HSPG2-204ENST00000412328 CNOT11Q9UKZ1 510 aaKnown RBP16.02■□□□□ 0.16
HSPG2-204ENST00000412328 POLR3HQ9Y535 204 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-204ENST00000412328 HCFC1P51610 2035 aa16.02■□□□□ 0.15
HSPG2-204ENST00000412328 CELSR2Q9HCU4 2923 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 GNG14A0A1W2PPG7 69 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 ZG16O60844 167 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 ANXA4P09525 319 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 PCSK2P16519 638 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 DDCP20711 480 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 TACR1P25103 407 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 DNASE1L1P49184 302 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 EXOSC7Q15024 291 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 KRT71Q3SY84 523 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 TRMT12Q53H54 448 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 XKR7Q5GH72 579 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 DND1Q8IYX4 353 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 GHDCQ8N2G8 530 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 ADCY4Q8NFM4 1077 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 FAM76AQ8TAV0 307 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 CCDC120Q96HB5 630 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 METTL2AQ96IZ6 378 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 IQCGQ9H095 443 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 NXF5Q9H1B4 397 aaKnown RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 SACM1LQ9NTJ5 587 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 TUBA8Q9NY65 449 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-204ENST00000412328 TINAGQ9UJW2 476 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 LIPGQ9Y5X9 500 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 PCNX3Q9H6A9 2034 aa16.01■□□□□ 0.15
HSPG2-204ENST00000412328 KIAA1549Q9HCM3 1950 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms