RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 A8MUI8 341 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 B2RBV5 119 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 F8W036 122 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 H7C0S8 307 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GAPDHSO14556 408 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 LCMT2O60294 686 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ENTPD6O75354 484 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF737O75373 536 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 RFPL2O75678 378 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSMD10O75832 226 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MFN2O95140 757 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGHV4-59P01825 116 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KRT19P08727 400 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYF5P13349 255 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SCG2P13521 617 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MSH3P20585 1137 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 DCKP27707 260 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 HTR1EP28566 365 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CD1BP29016 333 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SERPINB3P29508 390 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHKAP35790 457 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 TAGLN2P37802 199 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAGEA11P43364 429 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSMC4P43686 418 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC26A2P50443 739 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CTSCP53634 463 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MANFP55145 182 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MTTPP55157 894 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ADARP55265 1226 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 NDUFV3P56181 108 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 UBASH3AP57075 661 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMF1P82094 1093 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 FKBP3Q00688 224 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CDR2Q01850 454 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CDC16Q13042 620 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CUL4BQ13620 913 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GTF2H2Q13888 395 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PIGHQ14442 188 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GNMTQ14749 295 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 P2RY6Q15077 328 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHRNA6Q15825 494 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 INAQ16352 499 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM241Q24JQ0 296 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 AAK1Q2M2I8 961 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGGHGQ32M88 737 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM176BQ3YBM2 270 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZRANB3Q5FWF4 1079 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNASE13Q5GAN3 156 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRAMEF8Q5VWM4 474 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRAMEF7Q5VXH5 474 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA31B1PQ5VZV4 182 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CES4AQ5XG92 561 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC25A25Q6KCM7 469 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GTF2H2CQ6P1K8 395 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM171BQ6P995 826 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 EMBQ6PCB8 327 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLHL24Q6TFL4 600 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRSS55Q6UWB4 352 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C16orf89Q6UX73 402 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C2orf66Q6UXQ4 117 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF704Q6ZNC4 412 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 EPM2AIP1Q7L775 607 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MIER3Q7Z3K6 550 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF144BQ7Z419 303 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ISCA2Q86U28 154 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 NRROSQ86YC3 692 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 WDR49Q8IV35 697 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C4orf19Q8IY42 314 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CFAP206Q8IYR0 622 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM185AQ8N0U4 392 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CNTROBQ8N137 903 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 Q8N2B8 174 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CPXM2Q8N436 756 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KIF2BQ8N4N8 673 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 UBR7Q8N806 425 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C9orf163Q8N9P6 203 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 POGLUT1Q8NBL1 392 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 NAXEQ8NCW5 288 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PMFBP1Q8TBY8 1022 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ACTL9Q8TC94 416 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF139Q8WU17 664 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C15orf40Q8WUR7 153 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 L3HYPDHQ96EM0 354 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GALNT14Q96FL9 552 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SGSM3Q96HU1 749 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 Q96M85 177 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYADMQ96S97 322 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 RHNO1Q9BSD3 238 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SYT17Q9BSW7 474 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MMTAG2Q9BU76 263 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KIFC3Q9BVG8 833 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C1QTNF1Q9BXJ1 281 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 C22orf23Q9BZE7 217 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPR61Q9BZJ8 451 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 LSG1Q9H089 658 aaKnown RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 LMAN2LQ9H0V9 348 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR51J1Q9H342 316 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GLIPR2Q9H4G4 154 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRC19Q9H756 370 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KCNK13Q9HB14 408 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms