RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 LYNP07948 512 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 PPARGP37231 505 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 MATR3P43243 847 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 ALDH3B2P48448 385 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 CDH8P55286 799 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 ACSM1Q08AH1 577 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 IL18R1Q13478 541 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 BECN1Q14457 450 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 ZNF542PQ5EBM4 170 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 MS4A13Q5J8X5 152 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 KLHL35Q6PF15 583 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 MORN3Q6PF18 240 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 MSANTD1Q6ZTZ1 278 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 OTOAQ7RTW8 1153 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 ERICH1Q86X53 443 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 DIS3L2Q8IYB7 885 aaKnown RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 MCOLN2Q8IZK6 566 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 KIAA0895Q8NCT3 520 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 SYNPRQ8TBG9 265 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 CD99L2Q8TCZ2 262 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 SPACA9Q96E40 222 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 CCDC34Q96HJ3 373 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 ZNF560Q96MR9 790 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 NPAS2Q99743 824 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 AGXT2Q9BYV1 514 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 OPN3Q9H1Y3 402 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 NUFIP1Q9UHK0 495 aaKnown RBP-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 NCKAP1Q9Y2A7 1128 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 TP53TG5Q9Y2B4 290 aa-0.6□□□□□ -2.51
RNU6-554P-201ENST00000410466 IGSF9BQ9UPX0 1349 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 A0A1W2PPH5 198 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 A8MUA0 341 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 LCMT2O60294 686 aaKnown RBP-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 CDRT1O95170 752 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 IGLV6-57P01721 117 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 CLTBP09497 229 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 HOXB7P09629 217 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 STAG3L1P0CL83 205 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 CNTFP26441 200 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 GARSP41250 739 aaKnown RBP-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 CDH13P55290 713 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 VLDLRP98155 873 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 DDX10Q13206 875 aaKnown RBP-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 PPA1Q15181 289 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 UBE2SQ16763 222 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 UNC50Q53HI1 259 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 APOOLQ6UXV4 268 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 OSR2Q8N2R0 312 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 ICA1LQ8NDH6 482 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR2AP1Q8NGE2 309 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR10S1Q8NGN2 331 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 NDFIP1Q9BT67 221 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 GPR61Q9BZJ8 451 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 S100A14Q9HCY8 104 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 IL1RAPL2Q9NP60 686 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 NANSQ9NR45 359 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 IRAK4Q9NWZ3 460 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 GDAP2Q9NXN4 497 aa-0.61□□□□□ -2.51
RNU6-554P-201ENST00000410466 MYO1GB0I1T2 1018 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 K7EM74 188 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PGRMC2O15173 223 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 IPO8O15397 1037 aaKnown RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PPIP5K2O43314 1243 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 ZNF254O75437 659 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 CLEC3BP05452 202 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 H2AFZP0C0S5 128 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR1D4P47884 311 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR3A3P47888 321 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 ASCL1P50553 236 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 MFAP4P55083 255 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 LCP2Q13094 533 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 IL15RAQ13261 267 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 CRYMQ14894 314 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 KRT31Q15323 416 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 TBCEQ15813 527 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PCOTHQ58A44 107 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PAGE3Q5JUK9 113 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PLPP4Q5VZY2 271 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 NAA16Q6N069 864 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 C17orf107Q6ZR85 190 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 TMEM25Q86YD3 366 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 UBALD2Q8IYN6 164 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 SVIPQ8NHG7 77 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 TRIM63Q969Q1 353 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 NXNL1Q96CM4 212 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR2M2Q96R28 347 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 ALKBH7Q9BT30 221 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 TRIM9Q9C026 710 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 PAIP1Q9H074 479 aaKnown RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 LHX5Q9H2C1 402 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 ARHGEF38Q9NXL2 777 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 GGA3Q9NZ52 723 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 C6orf203Q9P0P8 240 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 RNF115Q9Y4L5 304 aa-0.62□□□□□ -2.51
RNU6-554P-201ENST00000410466 P2RX6O15547 441 aa-0.63□□□□□ -2.51
RNU6-554P-201ENST00000410466 NOL4O94818 638 aa-0.63□□□□□ -2.51
RNU6-554P-201ENST00000410466 OR2C1O95371 312 aa-0.63□□□□□ -2.51
RNU6-554P-201ENST00000410466 CALCAP01258 141 aa-0.63□□□□□ -2.51
RNU6-554P-201ENST00000410466 CSF2P04141 144 aa-0.63□□□□□ -2.51
RNU6-554P-201ENST00000410466 POLBP06746 335 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms