RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 TPM1P09493 284 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PCNAP12004 261 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 MSH2P43246 934 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 GIPRP48546 466 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PDLIM4P50479 330 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 SIRPAP78324 504 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 KRT85P78386 507 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 MEF2AQ02078 507 aaPredicted RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PTP4A2Q12974 167 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 NOMO1Q15155 1222 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 EXOC3L2Q2M3D2 409 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 NHSL2Q5HYW2 709 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 RHOUQ7L0Q8 258 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 GLT6D1Q7Z4J2 308 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 ADGRE4PQ86SQ3 457 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 GRAMD2AQ8IUY3 354 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 TRIM59Q8IWR1 403 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 SPC24Q8NBT2 197 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 ASZ1Q8WWH4 475 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 ABTB1Q969K4 478 aaPredicted RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 THOC1Q96FV9 657 aaKnown RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 TMX3Q96JJ7 454 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PTCHD1Q96NR3 888 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 OR2A5Q96R48 311 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 OR1F2PQ96R84 312 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 COPS8Q99627 209 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 C1QTNF5Q9BXJ0 243 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 TRIM5Q9C035 493 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 TRIM2Q9C040 744 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 TRABDQ9H4I3 376 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 ACSS1Q9NUB1 689 aaPredicted RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 DNAJC11Q9NVH1 559 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 CISD1Q9NZ45 108 aaKnown RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 CLCF1Q9UBD9 225 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 MYOTQ9UBF9 498 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 NKX1-2Q9UD57 310 aaPredicted RBP6.27□□□□□ -1.41
UBE2F-204ENST00000409953 CRLS1Q9UJA2 301 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 HPSEQ9Y251 543 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PKP3Q9Y446 797 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 PLCE1Q9P212 2302 aa6.27□□□□□ -1.41
UBE2F-204ENST00000409953 ZNF860A6NHJ4 632 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 BIN1O00499 593 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 MFSD11O43934 449 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SRP72O76094 671 aaKnown RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 URI1O94763 535 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 MYO1DO94832 1006 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 NDST3O95803 873 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 TSPAN15O95858 294 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 NPPAP01160 153 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ZNF3P17036 446 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ALOX12P18054 663 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 MAOAP21397 527 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 MDKP21741 143 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 IL10P22301 178 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 PTPN3P26045 913 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 IL2RGP31785 369 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 EFNA4P52798 201 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 DVL1P1P54792 670 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 CDH15P55291 814 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ARPC4P59998 168 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 BASP1P80723 227 aaKnown RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 OGDHQ02218 1023 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 PLOD1Q02809 727 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SRYQ05066 204 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 GRB7Q14451 532 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 PTPRCAPQ14761 206 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 CARTPTQ16568 116 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SYTL3Q4VX76 610 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 NCMAPQ5T1S8 102 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 C11orf71Q6IPW1 123 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 DNAJC24Q6P3W2 148 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SCIMPQ6UWF3 145 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 C17orf107Q6ZR85 190 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 CYP4V2Q6ZWL3 525 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 CREG2Q8IUH2 290 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 DCUN1D3Q8IWE4 304 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 RCOR2Q8IZ40 523 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 PRR18Q8N4B5 295 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ZNF610Q8N9Z0 462 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SLC35G2Q8TBE7 412 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ELMO1Q92556 727 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 NCLNQ969V3 563 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 RUNDC3BQ96NL0 473 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 FICDQ9BVA6 458 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 ACAT2Q9BWD1 397 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SPATA9Q9BWV2 254 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 RSPO3Q9BXY4 272 aaPredicted RBP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 VPS11Q9H270 941 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 GHITMQ9H3K2 345 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 TBCCD1Q9NVR7 557 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SYBUQ9NX95 663 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 UBP1Q9NZI7 540 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 MYO1AQ9UBC5 1043 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 PCYOX1Q9UHG3 505 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 SLC13A4Q9UKG4 626 aa6.26□□□□□ -1.41
UBE2F-204ENST00000409953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBE2F-204ENST00000409953 LYSTQ99698 3801 aa6.25□□□□□ -1.41
UBE2F-204ENST00000409953 A0A1W2PPH5 198 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms