RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 H3BNC9 293 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LATS1O95835 1130 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PRSS56P0CW18 603 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CD70P32970 193 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 OR1D4P47884 311 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 MNX1P50219 401 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ZP2Q05996 745 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PKDCCQ504Y2 493 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LHFPL3Q86UP9 236 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TMEM109Q9BVC6 243 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ANKRA2Q9H9E1 313 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 BCAS1O75363 584 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CLN5O75503 358 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 KNG1P01042 644 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 F11P03951 625 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 DCKP27707 260 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ERVK-8P63133 956 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ADAM15Q13444 863 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PPP1R3AQ16821 1122 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SPANXN4Q5MJ08 99 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 OR5L2Q8NGL0 311 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 C17orf50Q8WW18 174 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CAMK1GQ96NX5 476 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 EFCAB11Q9BUY7 163 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 KCNIP3Q9Y2W7 256 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 REXO2Q9Y3B8 237 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PCDHGA1Q9Y5H4 931 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 NSG1A0A0A6YYJ2 146 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SULT1B1O43704 296 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SLC16A8O95907 504 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ABHD2P08910 425 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 UEVLDQ8IX04 471 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LRRC25Q8N386 305 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PDCD1LG2Q9BQ51 273 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 KLHL9Q9P2J3 617 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LOC100130705A0A1B0GUX0 176 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SLC9B1P1A6NJY1 282 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GABRDO14764 452 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SLC7A4O43246 635 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LILRB3O75022 631 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 EDN1P05305 212 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GKN3PP0CG01 181 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SLC2A1P11166 492 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 AQP4P55087 323 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SEC23BQ15437 767 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SSX2Q16385 188 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TYSND1Q2T9J0 566 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ANKDD1AQ495B1 522 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PLEKHS1Q5SXH7 462 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 DCAF12Q5T6F0 453 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 USP43Q70EL4 1123 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SLC30A8Q8IWU4 369 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 IGSF8Q969P0 613 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 MUCL1Q96DR8 90 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ARHGAP23Q9P227 1491 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 A0A087WUU8 490 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 B8ZZF3 427 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CASC3O15234 703 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 RPS3P23396 243 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CBLBQ13191 982 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 CARM1Q86X55 608 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PIGCQ92535 297 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TPPP3Q9BW30 176 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF576Q9H609 170 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TAS2R10Q9NYW0 307 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LUZP4Q9P127 313 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PPLO60437 1756 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TRBV2A0A0J9YWF9 115 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 DISC1C4P0D8 188 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ORC5O43913 435 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 RAP2AP10114 183 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 DPP6P42658 865 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 NR4A2P43354 598 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 MAT1AQ00266 395 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GNMTQ14749 295 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PYURFQ96I23 114 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LPAR4Q99677 370 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 MCOLN1Q9GZU1 580 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ENKD1Q9H0I2 346 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TFB2MQ9H5Q4 396 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ABRACLQ9P1F3 81 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GPR52Q9Y2T5 361 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 RHBDD3Q9Y3P4 386 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TOXO94900 526 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GLSO94925 669 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 RPS17P08708 135 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PVRP15151 417 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SF3A2Q15428 464 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF773Q6PK81 442 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 FCAMRQ8WWV6 532 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF566Q969W8 418 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 FAM46BQ96A09 425 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SYNPO2LQ9H987 977 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 POLE4Q9NR33 117 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms