RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AIM2O14862 343 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ANGPT2O15123 496 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 RRP8O43159 456 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 DDAH2O95865 285 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 IGHEP01854 428 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 Q0VFX4 171 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 CDC20Q12834 499 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 BNIP1Q12981 228 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 DUSP8Q13202 625 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 RAPSNQ13702 412 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 CAPRIN1Q14444 709 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 C6orf163Q5TEZ5 329 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF621Q6ZSS3 439 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 PROSER1Q86XN7 944 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 OR52R1Q8NGF1 315 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF721Q8TF20 911 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 YIPF4Q9BSR8 244 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 EFHD1Q9BUP0 239 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF700Q9H0M5 742 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ACSS1Q9NUB1 689 aaPredicted RBP13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF891A8MT65 544 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 UPK1AO00322 258 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 PEX12O00623 359 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 ANP32DO95626 131 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 CBX7O95931 251 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 CLPSP04118 112 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 S1PR1P21453 382 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC26A5P58743 744 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 RPS26P62854 115 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 TLE3Q04726 772 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 NNATQ16517 81 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 C16orf47Q6ZP98 133 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 SAMD14Q8IZD0 417 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 VPS37AQ8NEZ2 397 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 ITCHQ96J02 903 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 CCDC115Q96NT0 180 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 TAS2R9Q9NYW1 312 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 MAP10Q9P2G4 905 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 LEF1Q9UJU2 399 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF223Q9UK11 482 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 PCDHGB4Q9UN71 923 aa13.13□□□□□ -0.31
CHRNA1-204ENST00000409323 TRBV11-1A0A0K0K1C0 115 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 A6NL46 340 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 MRASO14807 208 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 DNAJB5O75953 348 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 UBOX5O94941 541 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 IRX1P78414 480 aaPredicted RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 NFYCQ13952 458 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 FCRLBQ6BAA4 426 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 ANGPTL8Q6UXH0 198 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 LRRC69Q6ZNQ3 347 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 APCDD1LQ8NCL9 501 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 OR14A16Q8NHC5 309 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 CTHRC1Q96CG8 243 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 IMMP1LQ96LU5 166 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC35A5Q9BS91 424 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 PAIP1Q9H074 479 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 ZCCHC3Q9NUD5 404 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 BTNL2Q9UIR0 455 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 MAN2B2Q9Y2E5 1009 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 PCDHB14Q9Y5E9 798 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
CHRNA1-204ENST00000409323 RNF103-CHMP3A0A140T963 221 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 CYC1P08574 325 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 ITGAMP11215 1152 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 ADSLP30566 484 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 CCT3P49368 545 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 GPR143P51810 404 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 MAP4K2Q12851 820 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 MAPRE2Q15555 327 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 MSRB3Q8IXL7 192 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 NUP43Q8NFH3 380 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF675Q8TD23 568 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms