RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 GIN1Q9NXP7 522 aa12.16□□□□□ -0.46
LIMS2-203ENST00000409254 VPS4AQ9UN37 437 aa12.16□□□□□ -0.46
LIMS2-203ENST00000409254 C19orf53Q9UNZ5 99 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-203ENST00000409254 A0A087WV48 116 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 TRBV5-3A0A0A0MS03 114 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 C17orf105B2RV13 164 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 EMC8O43402 210 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 ATP5HO75947 161 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 C6orf47O95873 294 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 IFNA16P05015 189 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 NT5EP21589 574 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 PTPN6P29350 595 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 GPC1P35052 558 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 DGKQP52824 942 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 SOX8P57073 446 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 MGAT2Q10469 447 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 SF3A3Q12874 501 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 HSPB3Q12988 150 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 IL10RAQ13651 578 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 MMEL1Q495T6 779 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 VPS26BQ4G0F5 336 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 JMJD6Q6NYC1 403 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 C6orf89Q6UWU4 347 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 UNQ6494/PRO21346Q6UXR6 183 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 LANCL3Q6ZV70 420 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 PRSS58Q8IYP2 241 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 CCDC116Q8IYX3 515 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 LGI4Q8N135 537 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 NFAM1Q8NET5 270 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 OR4A15Q8NGL6 344 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 MIPOL1Q8TD10 442 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 SLC2A12Q8TD20 617 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 SNRNP27Q8WVK2 155 aaKnown RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 VPS33AQ96AX1 596 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 IMMP1LQ96LU5 166 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 SH3GL1Q99961 368 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 C1orf21Q9H246 121 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 MMP25Q9NPA2 562 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 DDX18Q9NVP1 670 aaKnown RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 PRODH2Q9UF12 536 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 IL17BQ9UHF5 180 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 NINQ8N4C6 2090 aa12.15□□□□□ -0.46
LIMS2-203ENST00000409254 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
LIMS2-203ENST00000409254 NSG1A0A0A6YYJ2 146 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 CCT8L1PA6NM43 557 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 MRASO14807 208 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 ASNA1O43681 348 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 KRT75O95678 551 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 DDAH2O95865 285 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 AGR2O95994 175 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 ABCB1P08183 1280 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 S1PR1P21453 382 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 GPR143P51810 404 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SLC37A1P57057 533 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SLC26A5P58743 744 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 DCAF7P61962 342 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 RPS18P62269 152 aaKnown RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 ID2Q02363 134 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 DUSP2Q05923 314 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 CDC20Q12834 499 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 FADDQ13158 208 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 TGIF1Q15583 401 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SPATS1Q496A3 300 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 C6orf10Q5SRN2 563 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 REP15Q6BDI9 236 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SHISA6Q6ZSJ9 500 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF551Q7Z340 670 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 DHDDSQ86SQ9 333 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 PROSER1Q86XN7 944 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 NUBPLQ8TB37 319 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 UCN3Q969E3 161 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SENP5Q96HI0 755 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 HOPXQ9BPY8 73 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 SPATA9Q9BWV2 254 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 PAIP1Q9H074 479 aaKnown RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 PNO1Q9NRX1 252 aaKnown RBP12.14□□□□□ -0.47
LIMS2-203ENST00000409254 P4HTMQ9NXG6 502 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 POLHQ9Y253 713 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 LAMA5O15230 3695 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 PCSK5Q92824 1860 aa12.14□□□□□ -0.47
LIMS2-203ENST00000409254 RNF103-CHMP3A0A140T963 221 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 C9JVG2 144 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 UPK1AO00322 258 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 EBAG9O00559 213 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 FBP2O00757 339 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 KLK10O43240 276 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 DNAJA2O60884 412 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 ANP32DO95626 131 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 CBX7O95931 251 aa12.13□□□□□ -0.47
LIMS2-203ENST00000409254 OTX2P32243 289 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms