RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 HRGP04196 525 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 CD3GP09693 182 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 PTHLHP12272 177 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 MAGEB1P43366 347 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 MAPK9P45984 424 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 CRYBA2P53672 197 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 ATP12AP54707 1039 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 CDH11P55287 796 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 PLAG1Q6DJT9 500 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 REEP3Q6NUK4 255 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 GATSQ8NAP1 163 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 SLC7A13Q8TCU3 470 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 C7orf34Q96L11 122 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 BARHL1Q9BZE3 327 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 PLA2G12AQ9BZM1 189 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 SLC6A17Q9H1V8 727 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 MAGIXQ9H6Y5 334 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 GPATCH2Q9NW75 528 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 ZNF224Q9NZL3 707 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 MYEF2Q9P2K5 600 aaKnown RBP7.9□□□□□ -1.15
SNX13-201ENST00000409076 EXTL2Q9UBQ6 330 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 I3L521 148 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 NARSO43776 548 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 RPP14O95059 124 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 RAE1P78406 368 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 CBLBQ13191 982 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 TEAD4Q15561 434 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 TATDN3Q17R31 274 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 ZNF542PQ5EBM4 170 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SFRP4Q6FHJ7 346 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 FAM9CQ8IZT9 166 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 METTL27Q8N6F8 245 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 PLA2G15Q8NCC3 412 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PEX13Q92968 403 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 BCL7BQ9BQE9 202 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 CCDC86Q9H6F5 360 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 PPIEQ9UNP9 301 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 KCNE3Q9Y6H6 103 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 ENPP4Q9Y6X5 453 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OTOFQ9HC10 1997 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 MEIS3P1A6NDR6 274 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OR2W5A6NFC9 320 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 HIDE1A8MVS5 230 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SOCS6O14544 535 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SLC30A4O14863 429 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 GPX2P18283 190 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PTPN6P29350 595 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SLC6A11P48066 632 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 CLDN12P56749 244 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 ZNF181Q2M3W8 571 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 C2orf27AQ580R0 203 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 C6orf132Q5T0Z8 1188 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PSRC1Q6PGN9 363 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 ZNF438Q7Z4V0 828 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 CALHM3Q86XJ0 350 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 ELMOD2Q8IZ81 293 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SIMC1Q8NDZ2 872 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OR4D11Q8NGI4 311 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OR6T1Q8NGN1 323 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OR2A12Q8NGT7 310 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 NEIL3Q8TAT5 605 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OPALINQ96PE5 141 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 FAIM2Q9BWQ8 316 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 MRPL9Q9BYD2 267 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 PPIL3Q9H2H8 161 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 SLAMF7Q9NQ25 335 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 NLGN3Q9NZ94 848 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 USP36Q9P275 1121 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 GRIP1Q9Y3R0 1128 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PCDHGA2Q9Y5H1 932 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 LOC100509620A0A075B734 347 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 FAM172BPA6NC97 362 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 LRRC72A6NJI9 287 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PRR23D1E9PI22 279 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 HOXC11O43248 304 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 GCM2O75603 506 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 HBQ1P09105 142 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PRR23D2P0DMB1 279 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 SIM1P81133 766 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 SREBF2Q12772 1141 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 MTAPQ13126 283 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 LRIF1Q5T3J3 769 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 PLBD1Q6P4A8 553 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 GALNT7Q86SF2 657 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SHISA5Q8N114 240 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SYNPOQ8N3V7 929 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 OR5H6Q8NGV6 325 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SUN5Q8TC36 379 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 SIPA1Q96FS4 1042 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 RIPOR3Q96MK2 946 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 KCTD7Q96MP8 289 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 DPCDQ9BVM2 203 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 ZNF717Q9BY31 904 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 STARD5Q9NSY2 213 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 MRPL39Q9NYK5 338 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 FNIP2Q9P278 1114 aa7.89□□□□□ -1.15
SNX13-201ENST00000409076 MRPS23Q9Y3D9 190 aaKnown RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 PCYT1BQ9Y5K3 369 aaPredicted RBP7.89□□□□□ -1.15
SNX13-201ENST00000409076 PTPRDP23468 1912 aa7.88□□□□□ -1.15
SNX13-201ENST00000409076 PROS1P07225 676 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms