RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 TIGARQ9NQ88 270 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 MAN2C1Q9NTJ4 1040 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 PTPRSQ13332 1948 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 COL4A3Q01955 1670 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 H7BY64 318 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 LGI1O95970 557 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 ERVFC1P60507 584 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 HNRNPA0Q13151 305 aaKnown RBP17.44■□□□□ 0.38
EWSR1-207ENST00000406548 ACSM5Q6NUN0 579 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 LINC00471Q8N535 108 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 CLDN22Q8N7P3 220 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 OR8D1Q8WZ84 308 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 UCN3Q969E3 161 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 NXPE3Q969Y0 559 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 TP53INP1Q96A56 240 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 PRAP1Q96NZ9 151 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 TRPC4Q9UBN4 977 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 SLC9A8Q9Y2E8 581 aa17.44■□□□□ 0.38
EWSR1-207ENST00000406548 RPN2P04844 631 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 EPHX1P07099 455 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 GPC1P35052 558 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 GIPRP48546 466 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 TAB1Q15750 504 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 GLYR1Q49A26 553 aaPredicted RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 FLYWCH1Q4VC44 716 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 FNDC3BQ53EP0 1204 aaKnown RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 C9orf64Q5T6V5 341 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 C22orf42Q6IC83 251 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 FAM131AQ6UXB0 335 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MORN4Q8NDC4 146 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 CREB3L4Q8TEY5 395 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 FGF11Q92914 225 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MSLNLQ96KJ4 702 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MIXL1Q9H2W2 232 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 ABCB9Q9NP78 766 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 SLC23A2Q9UGH3 650 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 ADAM29Q9UKF5 820 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 SPIN1Q9Y657 262 aaPredicted RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MSL3P1P0C860 447 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 CSF2RAP15509 400 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MYL12AP19105 171 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 HSD17B2P37059 387 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 CDK5Q00535 292 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 BNC1Q01954 994 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 SCN1BQ07699 218 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 MESP2Q0VG99 397 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 C3orf38Q5JPI3 329 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 C1orf94Q6P1W5 598 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 OLIG3Q7RTU3 272 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 UBE3DQ7Z6J8 389 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 AMER3Q8N944 861 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 PLA2G15Q8NCC3 412 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 BBS10Q8TAM1 723 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 TMEM203Q969S6 136 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 PRRC1Q96M27 445 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 GPA33Q99795 319 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 PCBD2Q9H0N5 130 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 GLIPR2Q9H4G4 154 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 NT5DC2Q9H857 520 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 ZCCHC3Q9NUD5 404 aaKnown RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 DDX28Q9NUL7 540 aaKnown RBP17.43■□□□□ 0.38
EWSR1-207ENST00000406548 ZSCAN32Q9NX65 697 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 FBXW2Q9UKT8 454 aa17.43■□□□□ 0.38
EWSR1-207ENST00000406548 PRRT4C9JH25 899 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 EPPINO95925 133 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 TSPAN19P0C672 248 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 CLEC2LP0C7M8 214 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 ACADMP11310 421 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 DDOSTP39656 456 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 KHKP50053 298 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 SMSP52788 366 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 WNT4P56705 351 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 LSM11P83369 360 aaKnown RBP eCLIP17.42■□□□□ 0.384e-8■■□□□ 11.8
EWSR1-207ENST00000406548 ASAH1Q13510 395 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 HNRNPA1L2Q32P51 320 aaKnown RBP17.42■□□□□ 0.38
EWSR1-207ENST00000406548 TMEM52BQ4KMG9 183 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 KLHL22Q53GT1 634 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 PRR23CQ6ZRP0 262 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 GATAD2AQ86YP4 633 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 OR6T1Q8NGN1 323 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 ING5Q8WYH8 240 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 AMDHD1Q96NU7 426 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 SNX18Q96RF0 628 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 PHOX2BQ99453 314 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 MENTQ9BUN1 341 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 RNF208Q9H0X6 261 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 DDX31Q9H8H2 851 aaKnown RBP17.42■□□□□ 0.38
EWSR1-207ENST00000406548 MARCH7Q9H992 704 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 TAS2R7Q9NYW3 318 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 PLEKHB1Q9UF11 243 aaPredicted RBP17.42■□□□□ 0.38
EWSR1-207ENST00000406548 CARD8Q9Y2G2 431 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 CKAP5Q14008 2032 aa17.42■□□□□ 0.38
EWSR1-207ENST00000406548 A0A0G2JN53 185 aa17.41■□□□□ 0.38
EWSR1-207ENST00000406548 LINC00854A0A1B0GVQ3 168 aa17.41■□□□□ 0.38
EWSR1-207ENST00000406548 A0A1W2PPV9 198 aa17.41■□□□□ 0.38
EWSR1-207ENST00000406548 TTC36A6NLP5 189 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms