RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CRIP2P52943 208 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 METAP1P53582 386 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 RPS4XP62701 263 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SPIBQ01892 262 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 RFTN2Q52LD8 501 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CENPPQ6IPU0 288 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CWC27Q6UX04 472 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 DPY19L2P2Q6ZN68 376 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GPR142Q7Z601 462 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 LHFPL4Q7Z7J7 247 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 VPS36Q86VN1 386 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CBWD2Q8IUF1 395 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 APLFQ8IW19 511 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GVQW1Q8N7I0 195 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 MLKLQ8NB16 471 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 TMEM178AQ8NBL3 297 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 STEAP2Q8NFT2 490 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR2T3Q8NH03 318 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GIPC3Q8TF64 312 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 LIPHQ8WWY8 451 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 MRPL24Q96A35 216 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 PINX1Q96BK5 328 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF501Q96CX3 271 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 FUCA2Q9BTY2 467 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 PINK1Q9BXM7 581 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 LRRCC1Q9C099 1032 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC7A5P2Q9GIP4 190 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 RPAP3Q9H6T3 665 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GORASP2Q9H8Y8 452 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CALHM2Q9HA72 323 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SNX6Q9UNH7 406 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GAB2Q9UQC2 676 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC6A5Q9Y345 797 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SF3B1O75533 1304 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 EIF4G1Q04637 1599 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 C15orf61A6NNL5 157 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 A8MU76 341 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MEI4A8MW99 385 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 NPIPB9F8W1W9 429 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 SDHDO14521 159 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 CXCL11O14625 94 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MAGEB3O15480 346 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 ANXA9O76027 345 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 CHRNA1P02708 482 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 AMBPP02760 352 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PRSS56P0CW18 603 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PPP2R1AP30153 589 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 GPR183P32249 361 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 TRIM23P36406 574 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MATKP42679 507 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PTGER3P43115 390 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MTIF2P46199 727 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZFP36L2P47974 494 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 ACADVLP49748 655 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 SGSHP51688 502 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 RPL27P61353 136 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PHEXP78562 749 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 NFATC2Q13469 925 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 DCAF4L1Q3SXM0 396 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 USH1GQ495M9 461 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 DCAF12Q5T6F0 453 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 FAM53AQ6NSI3 398 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 FIP1L1Q6UN15 594 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 ASRGL1Q7L266 308 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PTAR1Q7Z6K3 402 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 ARFGAP2Q8N6H7 521 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 NFAM1Q8NET5 270 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR10V1Q8NGI7 309 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 WDR36Q8NI36 951 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MAPK15Q8TD08 544 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 TCP11Q8WWU5 503 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 PNPLA2Q96AD5 504 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 C4orf36Q96KX1 117 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 CASD1Q96PB1 797 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 HOXD1Q9GZZ0 328 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC25A19Q9HC21 320 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 AGPAT5Q9NUQ2 364 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 SMPD3Q9NY59 655 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 HPCAL4Q9UM19 191 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 MRPS7Q9Y2R9 242 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 C2CD2Q9Y426 696 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 RNF215Q9Y6U7 377 aa4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 DDX49Q9Y6V7 483 aaKnown RBP4.19□□□□□ -1.74
HMGB1P13-201ENST00000406019 KIF26BQ2KJY2 2108 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 A0A087WW49 117 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 LINC00854A0A1B0GVQ3 168 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR5H15A6NDH6 313 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 FAM25EA8MYX2 175 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLCO1B7G3V0H7 640 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF195O14628 629 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 GPRIN2O60269 458 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 SNX4O95219 450 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 FHP07954 510 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF853P0CG23 659 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 CEBPBP17676 345 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 PAX9P55771 341 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 UBE2HP62256 183 aa4.18□□□□□ -1.74
HMGB1P13-201ENST00000406019 PPIAP62937 165 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms