RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 WBP1Q96G27 269 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 HIST1H2AHQ96KK5 128 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 HIST1H2AJQ99878 128 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 H2AFJQ9BTM1 129 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 ASPNQ9BXN1 380 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 CHST8Q9H2A9 424 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 HEXA-AS1Q9H8Q6 139 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 TAS2R16Q9NYV7 291 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 LHX3Q9UBR4 397 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 MUTYHQ9UIF7 546 aa15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 PRG3Q9Y2Y8 225 aaPredicted RBP15.39■□□□□ 0.06
COL4A3BP-204ENST00000405807 FAM74A7A6NL05 159 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZNF729A6NN14 1252 aaPredicted RBP15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 MPZL2O60487 215 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 HPGDSO60760 199 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 GPX5O75715 221 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 TPOP07202 933 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 CDH12P55289 794 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 CAMK1Q14012 370 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 RGNQ15493 299 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 FAM74A3Q4VXF1 159 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 UBE2R2Q712K3 238 aaPredicted RBP15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 C16orf59Q7L2K0 433 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 STPG2Q8N412 459 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 PIH1D2Q8WWB5 315 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 MAL2Q969L2 176 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 DUSP26Q9BV47 211 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZMIZ1Q9ULJ6 1067 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 GLYATL1P3A0A0U1RQE8 302 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 POM121BA6NF01 834 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 OR6C75A6NL08 312 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 TMEM229AB2RXF0 380 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 LAMP1P11279 417 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 RAC2P15153 192 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 ACTR1BP42025 376 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 RORCP51449 518 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 SGSHP51688 502 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 RPA4Q13156 261 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 EXOC3L2Q2M3D2 409 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 CHMP1BQ7LBR1 199 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC9B2Q86UD5 537 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 RDH10Q8IZV5 341 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 WDR36Q8NI36 951 aaKnown RBP15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC22A4Q9H015 551 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 EXOSC4Q9NPD3 245 aaKnown RBP15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 CLN6Q9NWW5 311 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 KCNK7Q9Y2U2 307 aa15.39■□□□□ 0.05
COL4A3BP-204ENST00000405807 NUP214P35658 2090 aaPredicted RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 A0A1W2PPL8 197 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 YY2O15391 372 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 CDC123O75794 336 aaPredicted RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 PDE9AO76083 593 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ATG12O94817 140 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 CXCL14O95715 111 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 CSF2P04141 144 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 FBP1P09467 338 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 PRKAR1AP10644 381 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 NDUFB7P17568 137 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 RPS19P39019 145 aaKnown RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 HNMTP50135 292 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 IFI44LQ53G44 452 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 SPOUT1Q5T280 376 aaKnown RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ANKRD54Q6NXT1 300 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 GDPGP1Q6ZNW5 385 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ASPGQ86U10 573 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 TAPBPLQ9BX59 468 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 QRSL1Q9H0R6 528 aaKnown RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 BTNL2Q9UIR0 455 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ADAM30Q9UKF2 790 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 TEX13CA0A0J9YWL9 993 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 LY86O95711 162 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 TRBC1P01850 177 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 AOAHP28039 575 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 SCN1BQ07699 218 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 PON3Q15166 354 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 CHRNA6Q15825 494 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 SSX1Q16384 188 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 BAK1Q16611 211 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ATXN7L2Q5T6C5 722 aaPredicted RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 USP53Q70EK8 1073 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 TRIM69Q86WT6 500 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 GPR151Q8TDV0 419 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ZNF431Q8TF32 576 aaPredicted RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 ASB15Q8WXK1 588 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 MAPKAP1Q9BPZ7 522 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 SLC12A9Q9BXP2 914 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 VPS29Q9UBQ0 182 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 NOD1Q9Y239 953 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 RUVBL1Q9Y265 456 aaKnown RBP15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 V9GYH0 126 aa15.38■□□□□ 0.05
COL4A3BP-204ENST00000405807 TRIM3O75382 744 aaPredicted RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 HLA-EP13747 358 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 DEFA6Q01524 100 aa15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 PTGES3Q15185 160 aaKnown RBP15.37■□□□□ 0.05
COL4A3BP-204ENST00000405807 EIF2S3LQ2VIR3 472 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms