RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 CCNJQ5T5M9 372 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
PRAME-205ENST00000405655 RNF44Q7L0R7 432 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 ZNF555Q8NEP9 628 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 OR4C15Q8NGM1 316 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 KIF17Q9P2E2 1029 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 GPR55Q9Y2T6 319 aaPredicted RBP13.21□□□□□ -0.29
PRAME-205ENST00000405655 ZNF780BQ9Y6R6 833 aa13.21□□□□□ -0.29
PRAME-205ENST00000405655 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 ENO4A6NNW6 628 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 PTGES3LE9PB15 166 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 BCKDKO14874 412 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 HTR1AP08908 422 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 CT62P0C5K7 136 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 PABPC4LP0CB38 370 aaKnown RBP13.21□□□□□ -0.3
PRAME-205ENST00000405655 EEF1B2P24534 225 aaKnown RBP13.21□□□□□ -0.3
PRAME-205ENST00000405655 XCR1P46094 333 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 BLKP51451 505 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 OR1D5P58170 312 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 RACK1P63244 317 aaKnown RBP13.21□□□□□ -0.3
PRAME-205ENST00000405655 IL5RAQ01344 420 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 CHRNEQ04844 493 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 PMS2P3Q13401 168 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.3
PRAME-205ENST00000405655 SNAP47Q5SQN1 464 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 TMEM236Q5W0B7 351 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 ARMC6Q6NXE6 501 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 THAP5Q7Z6K1 395 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 VRK2Q86Y07 508 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 ARMC8Q8IUR7 673 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 C8orf59Q8N0T1 100 aaPredicted RBP13.21□□□□□ -0.3
PRAME-205ENST00000405655 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 PIK3C3Q8NEB9 887 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 SLC35A4Q96G79 324 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 CCDC3Q9BQI4 270 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 CHRDQ9H2X0 955 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 KRT84Q9NSB2 600 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 SLC22A7Q9Y694 548 aa13.21□□□□□ -0.3
PRAME-205ENST00000405655 NPIPA5A0A0B4J1W7 369 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NPIPA7E9PJI5 369 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 TGFBR3LH3BV60 316 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 HRKO00198 91 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 AQP9O43315 295 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NPIPA8P0DM63 369 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 PPP2R1BP30154 601 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 BIRC2Q13490 618 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 PIN1Q13526 163 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 MLC1Q15049 377 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 ZNF691Q5VV52 312 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 USP53Q70EK8 1073 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 MCATQ8IVS2 390 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 LGI4Q8N135 537 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 TTC29Q8NA56 475 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 CAMKVQ8NCB2 501 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NCSTNQ92542 709 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SLC9A6Q92581 669 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CDS1Q92903 461 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SERINC2Q96SA4 455 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NELL2Q99435 816 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 RBM38Q9H0Z9 239 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 SEC14L3Q9UDX4 400 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NCOR1O75376 2440 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 OR5K4A6NMS3 321 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CYR61O00622 381 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 JRKO75564 520 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 MPIP34949 423 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SEPHS1P49903 392 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 PDX1P52945 283 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NXPH1P58417 271 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 ELOCQ15369 112 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 AMZ1Q400G9 498 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 FAHD1Q6P587 224 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CA13Q8N1Q1 262 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 C19orf47Q8N9M1 422 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 LZICQ8WZA0 190 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 SEMA6CQ9H3T2 930 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
PRAME-205ENST00000405655 MKLN1Q9UL63 735 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CLCA2Q9UQC9 943 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CHST2Q9Y4C5 530 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 CEPT1Q9Y6K0 416 aa13.2□□□□□ -0.3
PRAME-205ENST00000405655 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.19□□□□□ -0.3
PRAME-205ENST00000405655 GALR3O60755 368 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms