RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SPPL2AQ8TCT8 520 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 LZICQ8WZA0 190 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 OR7D2Q96RA2 312 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 RSPO3Q9BXY4 272 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 RUBCNLQ9H714 662 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 EQTNQ9NQ60 294 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 UBAP1Q9NZ09 502 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 ZNF451Q9Y4E5 1061 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 KCNE3Q9Y6H6 103 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 SCN2AQ99250 2005 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 NME6O75414 186 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 UBTFL6P0CB48 400 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 ARL4DP49703 201 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 EMP3P54852 163 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 FHL5Q5TD97 284 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 CHERPQ8IWX8 916 aaKnown RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 PEX11GQ96HA9 241 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 MS4A4EQ96PG1 132 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 TREX2Q9BQ50 279 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 PTGFRNQ9P2B2 879 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 TMEM184BQ9Y519 407 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 U3KQV3 271 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 CPED1A4D0V7 1026 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 A8MU76 341 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 TMEM150CB9EJG8 249 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 MFN2O95140 757 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ALPLP05186 524 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 SP9P0CG40 484 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 NR2F1P10589 423 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 CD247P20963 164 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ALDH3A2P51648 485 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 GK3PQ14409 553 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 SYT16Q17RD7 645 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ZNF528Q3MIS6 628 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 CYP27C1Q4G0S4 372 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 TRIM61Q5EBN2 209 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 TMPRSS9Q7Z410 1059 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 RABEPKQ7Z6M1 372 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ARMC8Q8IUR7 673 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 METTL27Q8N6F8 245 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-205ENST00000401607 TFAP2CQ92754 450 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 CNBD2Q96M20 576 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ACTRT3Q9BYD9 372 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 SMPD3Q9NY59 655 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-205ENST00000401607 BAG5Q9UL15 447 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 SLC6A14Q9UN76 642 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 PCDHGB5Q9Y5G0 923 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ADAMTS20P59510 1910 aa24.02■■□□□ 1.44
CPNE1-205ENST00000401607 ASXL3Q9C0F0 2248 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 TMEM247A6NEH6 219 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 ASNA1O43681 348 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 E2F6O75461 281 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 RECKO95980 971 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 OR1E2P47887 323 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 TXNL4AP83876 142 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 DUSP7Q16829 419 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 TRMT12Q53H54 448 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 MFSD12Q6NUT3 480 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 SLC23A3Q6PIS1 610 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 UGT2A3Q6UWM9 527 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 OLIG3Q7RTU3 272 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 KMT5CQ86Y97 462 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 EID2Q8N6I1 236 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 DOK4Q8TEW6 326 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 SDCCAG3Q96C92 435 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 MMABQ96EY8 250 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 NDUFAF4Q9P032 175 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 ZDBF2Q9HCK1 2354 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 EME2A4GXA9 379 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 PCDHGA12O60330 932 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 OR2B3O76000 313 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 PDE9AO76083 593 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 CHRM4P08173 479 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 FOLR1P15328 257 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 NELFEP18615 380 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 NT5EP21589 574 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 AVPR1BP47901 424 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 PPP2R2BQ00005 443 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 MGAT2Q10469 447 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 SQSTM1Q13501 440 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 PRICKLE4Q2TBC4 344 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 SHQ1Q6PI26 577 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 CARM1Q86X55 608 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 GPR32P1Q8NGA4 272 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 OR1L3Q8NH93 324 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 GEMIN6Q8WXD5 167 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 ADI1Q9BV57 179 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 OSBPL10Q9BXB5 764 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF768Q9H5H4 540 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 CLK4Q9HAZ1 481 aaKnown RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 BCL2L10Q9HD36 194 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 THSD1Q9NS62 852 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 USE1Q9NZ43 259 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 MAT2BQ9NZL9 334 aa24.01■■□□□ 1.43
CPNE1-205ENST00000401607 ATXN7L1Q9ULK2 861 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 C19orf53Q9UNZ5 99 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-205ENST00000401607 H0YIG0 161 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 TGFBR3LH3BV60 316 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 DPM1O60762 260 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 HPRP00739 348 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms