RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR1N1Q8NGS0 311 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 OR14A16Q8NHC5 309 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 BCAS4Q8TDM0 211 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ELP5Q8TE02 316 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ELP4Q96EB1 424 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 FBXL20Q96IG2 436 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 OR52E6Q96RD3 313 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ZBTB18Q99592 522 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 PELOQ9BRX2 385 aaKnown RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 CNPPD1Q9BV87 410 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 NUDT9Q9BW91 350 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 SIRT3Q9NTG7 399 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ASPDHA6ND91 283 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 RNASET2O00584 256 aaKnown RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 FCHO1O14526 889 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 CAPN3P20807 821 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 KLF10Q13118 480 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 DUSP8Q13202 625 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 EXOSC7Q15024 291 aaKnown RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 FHL5Q5TD97 284 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 GKAP1Q5VSY0 366 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 TMEM107Q6UX40 140 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 GK5Q6ZS86 529 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 VWA5B2Q8N398 1253 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF675Q8TD23 568 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 PSMF1Q92530 271 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 NCLNQ969V3 563 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 FER1L6-AS2Q96M78 137 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 SEMA4CQ9C0C4 833 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 MYLK2Q9H1R3 596 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 ATP13A2Q9NQ11 1180 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 SERHLQ9NQF3 203 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 UPK1AO00322 258 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 PLOD2O00469 737 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 PRKNO60260 465 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-204ENST00000401473 CBX7O95931 251 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 ITGAMP11215 1152 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 MC3RP41968 323 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 SLC37A1P57057 533 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 TLR1Q15399 786 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 TIGD2Q4W5G0 525 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 NATD1Q8N6N6 113 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 ZNF615Q8N8J6 731 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 ANKS4BQ8N8V4 417 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 PSMA8Q8TAA3 256 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 M1APQ8TC57 530 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 SPDL1Q96EA4 605 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 CCDC106Q9BWC9 280 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 TMEM45AQ9NWC5 275 aa14.83□□□□□ -0.04
HMGA1-204ENST00000401473 TLN1Q9Y490 2541 aaKnown RBP14.83□□□□□ -0.04
HMGA1-204ENST00000401473 PLOD3O60568 738 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CCDC22O60826 627 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 C1QCP02747 245 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 ABCB1P08183 1280 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 ICAM2P13598 275 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CDKN2CP42773 168 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 AIMP2Q13155 320 aaKnown RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 EXT1Q16394 746 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CLEC1AQ8NC01 280 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 OR5P2Q8WZ92 322 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 VPS50Q96JG6 964 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 MAGED4Q96JG8 741 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 INPP5KQ9BT40 448 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CXorf36Q9H7Y0 433 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 MMP25Q9NPA2 562 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 SLC6A13Q9NSD5 602 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 FAM120CQ9NX05 1096 aaKnown RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 LOC100653049A0A140TA62 436 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 TMEM200CA6NKL6 621 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 A6NL46 340 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 NR5A2O00482 541 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CFLARO15519 480 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 KRT34O76011 436 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 SERPINA7P05543 415 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 DDX5P17844 614 aaKnown RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CCL11P51671 97 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 PAGE3Q5JUK9 113 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 ANXA8L1Q5VT79 327 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 SLC2A7Q6PXP3 512 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 TREML1Q86YW5 311 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 APLFQ8IW19 511 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CLEC4FQ8N1N0 589 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 VPS37AQ8NEZ2 397 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 GTF2H4Q92759 462 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 THOC3Q96J01 351 aaKnown RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 OR10A5Q9H207 317 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 LIN28AQ9H9Z2 209 aaKnown RBP14.82□□□□□ -0.04
HMGA1-204ENST00000401473 TAS2R9Q9NYW1 312 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 DTX4Q9Y2E6 619 aa14.82□□□□□ -0.04
HMGA1-204ENST00000401473 CCDC154A6NI56 674 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 DYRK3O43781 588 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 CPSF4O95639 269 aaKnown RBP14.81□□□□□ -0.04
HMGA1-204ENST00000401473 GPC1P35052 558 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 EMDP50402 254 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 RRADP55042 308 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 SOX8P57073 446 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 KCNK10P57789 538 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 MAPKAPK3Q16644 382 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms