RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 FBXW8Q8N3Y1 598 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 MARVELD2Q8N4S9 558 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 CCNYL1Q8N7R7 359 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 GBP7Q8N8V2 638 aaPredicted RBP14.6□□□□□ -0.07
ATG4B-203ENST00000400772 SIMC1Q8NDZ2 872 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 OR7G1Q8NGA0 311 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 PHF10Q8WUB8 498 aaKnown RBP14.6□□□□□ -0.07
ATG4B-203ENST00000400772 CNRIP1Q96F85 164 aaPredicted RBP14.6□□□□□ -0.07
ATG4B-203ENST00000400772 PPCSQ9HAB8 311 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 TNFRSF12AQ9NP84 129 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 MID1IP1Q9NPA3 183 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 RYDENQ9NUL5 291 aaKnown RBP14.6□□□□□ -0.07
ATG4B-203ENST00000400772 MAT2BQ9NZL9 334 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 CNOT11Q9UKZ1 510 aaKnown RBP14.6□□□□□ -0.07
ATG4B-203ENST00000400772 DTX4Q9Y2E6 619 aa14.6□□□□□ -0.07
ATG4B-203ENST00000400772 A0A1B0GVC2 190 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 ACOT7O00154 380 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 ATP1B1P05026 303 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 TPOP07202 933 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 RFPL3SP0C7P2 107 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 CSNK2A2P19784 350 aaPredicted RBP14.59□□□□□ -0.07
ATG4B-203ENST00000400772 HTR1EP28566 365 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 DEKP35659 375 aaKnown RBP14.59□□□□□ -0.07
ATG4B-203ENST00000400772 SMSP52788 366 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 NAGLUP54802 743 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 DNAJB13P59910 316 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 VSNL1P62760 191 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 SLC18A2Q05940 514 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 CCDC153Q494R4 210 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 PRAMEF20Q5VT98 475 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 FRMD7Q6ZUT3 714 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 TAGAPQ8N103 731 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 FAM109AQ8N4B1 249 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 FAM13CQ8NE31 585 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 OR2W6PQ8NHA6 318 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 CTHRC1Q96CG8 243 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 KLHL29Q96CT2 875 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 CCDC126Q96EE4 140 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 FAIM2Q9BWQ8 316 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 SIRT5Q9NXA8 310 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 GRID1Q9ULK0 1009 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 DLGAP4Q9Y2H0 992 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.59□□□□□ -0.07
ATG4B-203ENST00000400772 DNAJC13O75165 2243 aa14.59□□□□□ -0.07
ATG4B-203ENST00000400772 NINQ8N4C6 2090 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 ATP6AP2A0A1C7CYW4 349 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 GOLGA6L10A6NI86 522 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 PCDH7O60245 1069 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 ATP6AP2O75787 350 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 LRATO95237 230 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 IL3P08700 152 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 PRF1P14222 555 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 KRT4P19013 534 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 GPX3P22352 226 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 ALDH9A1P49189 494 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 FBXW4P57775 412 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 BTKQ06187 659 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 EXOSC7Q15024 291 aaKnown RBP14.58□□□□□ -0.08
ATG4B-203ENST00000400772 TRMT12Q53H54 448 aaKnown RBP14.58□□□□□ -0.08
ATG4B-203ENST00000400772 GALNT18Q6P9A2 607 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 PAOXQ6QHF9 649 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 TRILQ7L0X0 811 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 C4orf33Q8N1A6 199 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 VWA5B2Q8N398 1253 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 C17orf47Q8NEP4 570 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 ADCY4Q8NFM4 1077 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 OR5M3Q8NGP4 307 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 C16orf78Q8WTQ4 265 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 BRINP2Q9C0B6 783 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 OXSMQ9NWU1 459 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 CNIH4Q9P003 139 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 UTS2RQ9UKP6 389 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 PSME2Q9UL46 239 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 NPFFR2Q9Y5X5 522 aa14.58□□□□□ -0.08
ATG4B-203ENST00000400772 CRYBG3Q68DQ2 2970 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 LRRC3CA6NJW4 275 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 NPIPA2E9PIF3 369 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 NPIPA3F8WFD2 350 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 C19orf84I3L1E1 186 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 COPEO14579 308 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 HNRNPRO43390 633 aaKnown RBP14.57□□□□□ -0.08
ATG4B-203ENST00000400772 CDH16O75309 829 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 CBX7O95931 251 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 DRD2P14416 443 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 CPA3P15088 417 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 TIA1P31483 386 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATG4B-203ENST00000400772 ACSM2AQ08AH3 577 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 SLC10A1Q14973 349 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 LTB4RQ15722 352 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 PRSS53Q2L4Q9 553 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 GXYLT1Q4G148 440 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 SPIN4Q56A73 249 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 HLA-DQA1Q5Y7H0 255 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 ACSM2BQ68CK6 577 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 BICRALQ6AI39 1079 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 RPRMLQ8N4K4 120 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 RDH11Q8TC12 318 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 SPPL2AQ8TCT8 520 aa14.57□□□□□ -0.08
ATG4B-203ENST00000400772 MARVELD3Q96A59 401 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms