RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 DUSP26Q9BV47 211 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 RMND5AQ9H871 391 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SLC52A3Q9NQ40 469 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 DUSP22Q9NRW4 184 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CORO2BQ9UQ03 480 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CFLARO15519 480 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 OR10H2O60403 315 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 PEX11AO75192 247 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SKAP2O75563 359 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 SLC22A3O75751 556 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 NADKO95544 446 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 G6PDP11413 515 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 BMP2P12643 396 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 TACR1P25103 407 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 KIR3DL1P43629 444 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 WNT3P56703 355 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 STX1BP61266 288 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 EEF1A2Q05639 463 aaKnown RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 SLC9B1Q4ZJI4 515 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 LYPD8Q6UX82 237 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 TAGAPQ8N103 731 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 TRIML2Q8N7C3 387 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CDRT4Q8N9R6 151 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 C10orf82Q8WW14 230 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SLC35B4Q969S0 331 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 NCLNQ969V3 563 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 ELP4Q96EB1 424 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SENP5Q96HI0 755 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 VSTM2LQ96N03 204 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SLC25A23Q9BV35 468 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 YIPF2Q9BWQ6 316 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 GLIPR2Q9H4G4 154 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 ZNF160Q9HCG1 818 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 QPCTLQ9NXS2 382 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 TAS2R9Q9NYW1 312 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CNIH4Q9P003 139 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 MRTO4Q9UKD2 239 aaKnown RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 MRPS18CQ9Y3D5 142 aaKnown RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 PCDHGB3Q9Y5G1 929 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CFAP54Q96N23 3096 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 TMEM200CA6NKL6 621 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CCDC22O60826 627 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 JRKO75564 520 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 NKX2-2O95096 273 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CBX7O95931 251 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 B3GALT4O96024 378 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 STATHP02808 62 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 UQCRC2P22695 453 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CASRP41180 1078 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 AQP5P55064 265 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 DIO3P55073 304 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 EFR3AQ14156 821 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 NTRK2Q16620 822 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP16-204ENST00000399976 DEFB109BQ30KR1 87 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 GALNTL6Q49A17 601 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 VPS26BQ4G0F5 336 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 BLOC1S3Q6QNY0 202 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 PCSK4Q6UW60 755 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 HACD2Q6Y1H2 254 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 NUP54Q7Z3B4 507 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 PIGWQ7Z7B1 504 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 CHDHQ8NE62 594 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 WWTR1Q9GZV5 400 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 OR10A5Q9H207 317 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 SLCO1B3Q9NPD5 702 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 SIRT3Q9NTG7 399 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 MYOTQ9UBF9 498 aa6.99□□□□□ -1.29
USP16-204ENST00000399976 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
USP16-204ENST00000399976 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 A0A0G2JN53 185 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 C2orf92A0A1B0GVN3 265 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 GMNCA6NCL1 334 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ASPDHA6ND91 283 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 OR6C70A6NIJ9 312 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ARGFXA6NJG6 315 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 DUXAA6NLW8 204 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 LDB3O75112 727 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ERN1O75460 977 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 SORBS2O94875 1100 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 ITGAMP11215 1152 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 LSP1P33241 339 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 EMDP50402 254 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 PSMD4P55036 377 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 KLRB1Q12918 225 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 SRSF6Q13247 344 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 BTBD16Q32M84 506 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 CGB2Q6NT52 195 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 RPS19BP1Q86WX3 136 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 SLC34A3Q8N130 599 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 NEURL3Q96EH8 262 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 GIMAP5Q96F15 307 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 THOC3Q96J01 351 aaKnown RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 LCORQ96JN0 433 aaPredicted RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 EBPLQ9BY08 206 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 DEFB126Q9BYW3 111 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 SLC25A18Q9H1K4 315 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms