RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GABRR3A8MPY1 467 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 RPL35P42766 123 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 INHBCP55103 352 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 HTD2P86397 168 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM189A2Q15884 450 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 PACRGLQ8N7B6 248 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 OR13C3Q8NGS6 347 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ELP5Q8TE02 316 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ERVK-6Q9BXR3 956 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 NMUR2Q9GZQ4 415 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ERVK-19Q9WJR5 959 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 KLRC4-KLRK1H3BQV0 150 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC1A7O00341 560 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ADAMDEC1O15204 470 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 TIMM8AO60220 97 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF43P17038 809 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 DPP4P27487 766 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 SOX9P48436 509 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 DSC3Q14574 896 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 LASP1Q14847 261 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ECM1Q16610 540 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 CHRFAM7AQ494W8 412 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM110Q86TL2 294 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 PLD5Q8N7P1 536 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 PSD4Q8NDX1 1056 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 HOPXQ9BPY8 73 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM234AQ9H0X4 552 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 TXNRD2Q9NNW7 524 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM184CQ9NVA4 438 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 COL20A1Q9P218 1284 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ZMAT5Q9UDW3 170 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 EMC9Q9Y3B6 208 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 CAPN8A6NHC0 703 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 TERTO14746 1132 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 BCKDKO14874 412 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 RPLP0P05388 317 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 LSAMPQ13449 338 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 DUOXA1Q1HG43 343 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC36A3Q495N2 470 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 PLET1Q6UQ28 207 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 AGAP2Q99490 1192 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 C2orf78A6NCI8 922 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 FOXN2P32314 431 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ADH7P40394 386 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 P2RY2P41231 377 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 DOC2AQ14183 400 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 OR8B8Q15620 311 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 PRR22Q8IZ63 422 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ELMOD2Q8IZ81 293 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 KLHL36Q8N4N3 616 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 AGBL5Q8NDL9 886 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 OR10A6Q8NH74 314 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 SIX2Q9NPC8 291 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 B3GNT2Q9NY97 397 aa10.49□□□□□ -0.73
CACNA1C-216ENST00000399638 ANKRD33BA6NCL7 494 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 BBIP1A8MTZ0 92 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 PIK3C2AO00443 1686 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TPSB2P20231 275 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TPSAB1Q15661 275 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 KDM3BQ7LBC6 1761 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SCCPDHQ8NBX0 429 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 THAP6Q8TBB0 222 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF578Q96N58 590 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 AMDHD1Q96NU7 426 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SAP130Q9H0E3 1048 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM9BQ9NQ34 198 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 STARD5Q9NSY2 213 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FADS3Q9Y5Q0 445 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TSFMP43897 325 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 CSNK1EP49674 416 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 E2F1Q01094 437 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 GALNT1Q10472 559 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 LTC4SQ16873 150 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 DCAF4L2Q8NA75 395 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 OR56B2PQ8NGI1 322 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 NFKBIDQ8NI38 313 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ST7LQ8TDW4 575 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 CLEC4DQ8WXI8 215 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 MOCOSQ96EN8 888 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 NUDT15Q9NV35 164 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 WDR45Q9Y484 360 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 hCG_1809904A0A1W2PP81 198 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A1W2PPE2 198 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A1W2PR64 198 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC6A6P31641 620 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 RHDQ02161 417 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 LCP2Q13094 533 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 RSU1Q15404 277 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FIGLAQ6QHK4 219 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF367Q7RTV3 350 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TP53INP2Q8IXH6 220 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms