RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 OR12D1P0DN82 309 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 CKBP12277 381 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 EVX1P49640 407 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 ACLYP53396 1101 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SF3A2Q15428 464 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 CDONQ4KMG0 1287 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 B3GLCTQ6Y288 498 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 DNAJC5GQ8N7S2 189 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 POLDIP3Q9BY77 421 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 HDHD2Q9H0R4 259 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 PPIL3Q9H2H8 161 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 SUV39H2Q9H5I1 410 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 MIEF1Q9NQG6 463 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 ZSCAN32Q9NX65 697 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 B3GNT2Q9NY97 397 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 KCNE2Q9Y6J6 123 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SHISA3A0PJX4 238 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 TSPAN6O43657 245 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 FAM26DQ5JW98 314 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 LHFPL3Q86UP9 236 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 OVCA2Q8WZ82 227 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SLC9A6Q92581 669 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SLC28A3Q9HAS3 691 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 CDH10Q9Y6N8 788 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 BTN3A3O00478 584 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SLCO2B1O94956 709 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 LALBAP00709 142 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 EPHX1P07099 455 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SRPRAP08240 638 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 ACADMP11310 421 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 M6PRP20645 277 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 GABRA5P31644 462 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 GAS1P54826 345 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 TPBGQ13641 420 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 FCN2Q15485 313 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 KLHL22Q53GT1 634 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 C3orf38Q5JPI3 329 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 KIAA1841Q6NSI8 718 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 ASB18Q6ZVZ8 466 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 OR8H3Q8N146 312 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 ARL14EPQ8N8R7 260 aaPredicted RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 OR56A3Q8NH54 315 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 LRRC20Q8TCA0 184 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 TMEM159Q96B96 161 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 PDXPQ96GD0 296 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 TEFMQ96QE5 360 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 GPA33Q99795 319 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 SPNS1Q9H2V7 528 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 DMRT3Q9NQL9 472 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 GLTPQ9NZD2 209 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 STOML2Q9UJZ1 356 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 FBXW2Q9UKT8 454 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 M0R3H8 397 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 ZNF197O14709 1029 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 CATP04040 527 aaKnown RBP13.23□□□□□ -0.29
APOB-202ENST00000399256 UQCRC2P22695 453 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 MMP11P24347 488 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
APOB-202ENST00000399256 ZBTB37Q5TC79 503 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 OLIG3Q7RTU3 272 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 RASGRP3Q8IV61 690 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 ADAMTS19Q8TE59 1207 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
APOB-202ENST00000399256 MYNNQ9NPC7 610 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 PDHA2P29803 388 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 GIPRP48546 466 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 TBPL1P62380 186 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 COMTD1Q86VU5 262 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 ANKK1Q8NFD2 765 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 DNAJA4Q8WW22 397 aaPredicted RBP13.23□□□□□ -0.29
APOB-202ENST00000399256 KCNJ15Q99712 375 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 EGLN3Q9H6Z9 239 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 CLCA2Q9UQC9 943 aa13.23□□□□□ -0.29
APOB-202ENST00000399256 A0A0A6YYJ9 748 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 CD8B2A6NJW9 211 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
APOB-202ENST00000399256 RFPL3O75679 317 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 SOD1P00441 154 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 CD8BP10966 210 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 CTSCP53634 463 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
APOB-202ENST00000399256 BCL2L15Q5TBC7 163 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 ZNF740Q8NDX6 193 aa13.22□□□□□ -0.29
APOB-202ENST00000399256 ZNF431Q8TF32 576 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms