RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 BRIX1Q8TDN6 353 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 VMP1Q96GC9 406 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RILPQ96NA2 401 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 BBS4Q96RK4 519 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DUSP26Q9BV47 211 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 BHLHE41Q9C0J9 482 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 LHPPQ9H008 270 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FAM107BQ9H098 131 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF552Q9H707 407 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ACSS1Q9NUB1 689 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ADAM21Q9UKJ8 722 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DTX4Q9Y2E6 619 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CACNA1BQ00975 2339 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TRBV11-1A0A0K0K1C0 115 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ASPDHA6ND91 283 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PLOD2O00469 737 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PLOD3O60568 738 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF354AO60765 605 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NME6O75414 186 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SLC22A3O75751 556 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PSMG1O95456 288 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C6orf47O95873 294 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PDGFAP04085 211 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FAM87AP0C7U9 286 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ITGA3P26006 1051 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MPIP34949 423 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MC3RP41968 323 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CLNS1AP54105 237 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 HSPB3Q12988 150 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MYBPC3Q14896 1274 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MLC1Q15049 377 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EBPQ15125 230 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 METTL21CQ5VZV1 264 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FCRLBQ6BAA4 426 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TMEM107Q6UX40 140 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C16orf47Q6ZP98 133 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ARMC10Q8N2F6 343 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CPSF7Q8N684 471 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SIRT6Q8N6T7 355 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EXD3Q8N9H8 876 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PSMA8Q8TAA3 256 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ELP4Q96EB1 424 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CXorf36Q9H7Y0 433 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZBTB20Q9HC78 741 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GIMAP4Q9NUV9 329 aa11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NUP214P35658 2090 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-203ENST00000399082 A0A1W2PRB8 838 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 UPK1AO00322 258 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C1QCP02747 245 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 IFI6P09912 130 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ICAM2P13598 275 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NCF2P19878 526 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CAPN3P20807 821 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 KIR3DL1P43629 444 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EMDP50402 254 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ST13P50502 369 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CLCN2P51788 898 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 HBA1P69905 142 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RNF4P78317 190 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RCAN2Q14206 197 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SQLEQ14534 574 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RPS6KA2Q15349 733 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 JMJD6Q6NYC1 403 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PIGWQ7Z7B1 504 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ANKRD46Q86W74 232 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR2L13Q8N349 312 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZNF441Q8N8Z8 693 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GLB1L3Q8NCI6 653 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR52R1Q8NGF1 315 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C16orf52Q8NHV5 167 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZBED6CLQ96FA7 236 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EPN3Q9H201 632 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR10A5Q9H207 317 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LIN28AQ9H9Z2 209 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SERHLQ9NQF3 203 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SAR1AQ9NR31 198 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ATAD3AQ9NVI7 634 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GPR83Q9NYM4 423 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NTMQ9P121 344 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PTGFRNQ9P2B2 879 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MAPRE3Q9UPY8 281 aa11.52□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 A0A087WV62 115 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FAM234BA2RU67 622 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RNASET2O00584 256 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NADKO95544 446 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PGRP06401 933 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 S100A3P33764 101 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CDKN2CP42773 168 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 POLR2JP52435 117 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MANFP55145 182 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 STX1BP61266 288 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 IRX1P78414 480 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms