RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PIGGQ5H8A4 983 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RNFT1Q5M7Z0 435 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TMEM64Q6YI46 380 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GFM2Q969S9 779 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C20orf27Q9GZN8 174 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ANKRA2Q9H9E1 313 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CROCCQ5TZA2 2017 aa13.02□□□□□ -0.32
HLA-DQB1-202ENST00000399079 POLEQ07864 2286 aa13.02□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C2orf92A0A1B0GVN3 265 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ATP6AP2A0A1C7CYW4 349 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR6C76A6NM76 312 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NPIPB8E9PQR5 432 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 G3V3Y1 287 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BIRC5O15392 142 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PEX1O43933 1283 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ATP6AP2O75787 350 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 UNC5CO95185 931 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZWINTO95229 277 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PCSK2P16519 638 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MEOX1P50221 254 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RPL38P63173 70 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 DUSP8Q13202 625 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 UBAP2LQ14157 1087 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 C6orf163Q5TEZ5 329 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CLEC18BQ6UXF7 455 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RNF165Q6ZSG1 346 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TICAM1Q8IUC6 712 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM98AQ8NCA5 519 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CTHRC1Q96CG8 243 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 C3orf30Q96M34 536 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MYNNQ9NPC7 610 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TIMMDC1Q9NPL8 285 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF639Q9UID6 485 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HIVEP3Q5T1R4 2406 aa13.02□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZGRF1Q86YA3 2104 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NPIPA5E9PKD4 350 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PEX11AO75192 247 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NME6O75414 186 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HSPA4LO95757 839 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CBX7O95931 251 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SERPINE1P05121 402 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 JUNP05412 331 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CCL3P10147 92 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NEFHP12036 1026 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BGNP21810 368 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GSTM5P46439 218 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ALDH6A1Q02252 535 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF791Q3KP31 576 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FHL5Q5TD97 284 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OPN5Q6U736 354 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GFRALQ6UXV0 394 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GPALPP1Q8IXQ4 340 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF781Q8N8C0 355 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF441Q8N8Z8 693 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR7G1Q8NGA0 311 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CLHC1Q8NHS4 586 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC22A8Q8TCC7 542 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 KAT2AQ92830 837 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 METTL2AQ96IZ6 378 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FCRL1Q96LA6 429 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BCAP29Q9UHQ4 241 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NPIPA1Q9UND3 350 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OSGIN2Q9Y236 505 aa13.01□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 KLRC4-KLRK1H3BQV0 150 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNHIT1O43257 154 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 AGFG2O95081 481 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 LRATO95237 230 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SDC1P18827 310 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 WDR4P57081 412 aaKnown RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ABCE1P61221 599 aaKnown RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CEBPEQ15744 281 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms