RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 DOCK4Q8N1I0 1966 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 NUMA1Q14980 2115 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC38A8A6NNN8 435 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 H3BUI4 141 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 M0R3H8 397 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MPZL2O60487 215 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC22A5O76082 557 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 OAZ2O95190 189 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 C1SP09871 688 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 AGFG1P52594 562 aaKnown RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MVDP53602 400 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 TLE2Q04725 743 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 RING1Q06587 406 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 HSPB3Q12988 150 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 TECPR1Q7Z6L1 1165 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MRPL10Q7Z7H8 261 aaKnown RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 COMMD7Q86VX2 200 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 L3MBTL4Q8NA19 623 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 PROKR2Q8NFJ6 384 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 UBTD2Q8WUN7 234 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 RDH14Q9HBH5 336 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MIEF1Q9NQG6 463 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 EXTL2Q9UBQ6 330 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 SPATA2Q9UM82 520 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 RALGAPA2Q2PPJ7 1873 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A0A6YYJ9 748 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A1W2PRB8 838 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 RTCAO00442 366 aaKnown RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC16A8O95907 504 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 IL1AP01583 271 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 GJA1P17302 382 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 NNMTP40261 264 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 PRKAG1P54619 331 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 PLD1Q13393 1074 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 MBTPS1Q14703 1052 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 ADGRF1Q5T601 910 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF730Q6ZMV8 503 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 C11orf96Q7Z7L8 435 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 NEIL3Q8TAT5 605 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 PIGKQ92643 395 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 WDFY2Q96P53 400 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 C17orf62Q9BQA9 187 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 YIPF4Q9BSR8 244 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 CHIAQ9BZP6 476 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 ABCG5Q9H222 651 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 CHST8Q9H2A9 424 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 ING4Q9UNL4 249 aa9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 EXO1Q9UQ84 846 aaKnown RBP9.36□□□□□ -0.91
PTCHD4-202ENST00000398738 IFNA14P01570 189 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 FCER2P06734 321 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PCSK2P16519 638 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF8P17098 575 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 RHCEP18577 417 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PPIBP23284 216 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OPRD1P41143 372 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 VEGFBP49765 207 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 DCDC1P59894 354 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CLLU1OSQ5K130 101 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 RTP2Q5QGT7 225 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZBTB37Q5TC79 503 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CCSAPQ6IQ19 270 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 AGTRAPQ6RW13 159 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CRTC1Q6UUV9 634 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 IDO2Q6ZQW0 420 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF740Q8NDX6 193 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4F15Q8NGB8 312 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC7A13Q8TCU3 470 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 AP3S1Q92572 193 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.35□□□□□ -0.911e-15■■□□□ 11.6
PTCHD4-202ENST00000398738 EGLN3Q9H6Z9 239 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC25A19Q9HC21 320 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 C1GALT1Q9NS00 363 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 EIF3KQ9UBQ5 218 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PPIEQ9UNP9 301 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CORO2BQ9UQ03 480 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ANGPT4Q9Y264 503 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A0G2JN53 185 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SHISA3A0PJX4 238 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF623O75123 536 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SEMA7AO75326 666 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 RFPL3O75679 317 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 LALBAP00709 142 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CXCL3P19876 107 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 VSX2P58304 361 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PTSQ03393 145 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 BTN1A1Q13410 526 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SYTL3Q4VX76 610 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms