RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 C22orf42Q6IC83 251 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 TMEM107Q6UX40 140 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 TFAP2EQ6VUC0 442 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 PTCHD4Q6ZW05 846 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 RGL4Q8IZJ4 473 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 RBFAQ8N0V3 343 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF655Q8N720 491 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR11H7Q8NGC8 314 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 ST8SIA2Q92186 375 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 MYO19Q96H55 970 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 CDKN2AIPNLQ96HQ2 116 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 CDX2Q99626 313 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 KCNJ15Q99712 375 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 POLR2J2Q9GZM3 115 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 KCNMB2Q9Y691 235 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 A0A1W2PPL8 197 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SGK494L7N484 410 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 GTPBP1O00178 669 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 NIPSNAP2O75323 286 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 CTSLP07711 333 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SSTR2P30874 369 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF81P51508 661 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 HSF2Q03933 536 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 IL18Q14116 193 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 PTGES3Q15185 160 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SNAPC1Q16533 368 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 LIPKQ5VXJ0 399 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 CHMP1BQ7LBR1 199 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 TSEN54Q7Z6J9 526 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 LUZP2Q86TE4 346 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 PDZD3Q86UT5 571 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 LGI4Q8N135 537 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SRFBP1Q8NEF9 429 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 AP3S1Q92572 193 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SIPA1Q96FS4 1042 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 WBP1Q96G27 269 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 P2RY13Q9BPV8 354 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 DPH2Q9BQC3 489 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 MND1Q9BWT6 205 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 NT5DC2Q9H857 520 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 LYARQ9NX58 379 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 SLCO1C1Q9NYB5 712 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 KCMF1Q9P0J7 381 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 COMMD3Q9UBI1 195 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 PADI2Q9Y2J8 665 aa9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 HELZP42694 1942 aaKnown RBP9.61□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF98A6NK75 572 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ADAMDEC1O15204 470 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 MPZL2O60487 215 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ULK1O75385 1050 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 PSIP1O75475 530 aaKnown RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 CLDN7O95471 211 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 CFDP00746 253 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 HBQ1P09105 142 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 CISD3P0C7P0 127 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ANXA3P12429 323 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 F8A1P23610 371 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 STOMP27105 288 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 MLLT11Q13015 90 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 RETSATQ6NUM9 610 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 METAP1DQ6UB28 335 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 TRIM46Q7Z4K8 759 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR4K2Q8NGD2 314 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR4C15Q8NGM1 316 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR2A12Q8NGT7 310 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 REG4Q9BYZ8 158 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 GSX2Q9BZM3 304 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 LMAN2LQ9H0V9 348 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 SLC6A15Q9H2J7 730 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 SLC25A19Q9HC21 320 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 GLS2Q9UI32 602 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ACSL5Q9ULC5 683 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 PPT2Q9UMR5 302 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 STON1Q9Y6Q2 735 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 NUPL2O15504 423 aaKnown RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 SUV39H1O43463 412 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 HRO43593 1189 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 HPGDSO60760 199 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 ENTPD6O75354 484 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 PTP4A3O75365 173 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 LEFTY1O75610 366 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 WDPCPO95876 746 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 PKMP14618 531 aaKnown RBP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 GPX2P18283 190 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 DDX6P26196 483 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 OPRD1P41143 372 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 HSPA7P48741 367 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 SPIBQ01892 262 aa9.6□□□□□ -0.87
HMGCLL1-205ENST00000398661 PUDPQ08623 228 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms