RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 RHDQ02161 417 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 SEC23BQ15437 767 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 LRIF1Q5T3J3 769 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC44A3Q8N4M1 653 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 IMP4Q96G21 291 aaKnown RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 PISDQ9UG56 409 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 ADORA3P0DMS8 318 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 UGT8Q16880 541 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 LIPJQ5W064 366 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 RNF38Q9H0F5 515 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 OR51B6Q9H340 312 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 NUDT15Q9NV35 164 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 OARD1Q9Y530 152 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 M0R036 132 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 MAOBP27338 520 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 EPHA4P54764 986 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 RCAN2Q14206 197 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 C3orf33Q6P1S2 294 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 ACTL7AQ9Y615 435 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 RTCAO00442 366 aaKnown RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 GRK1Q15835 563 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 SCML4Q8N228 414 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 TM9SF3Q9HD45 589 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 ACTR3BQ9P1U1 418 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 MAFKO60675 156 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 GPR37L1O60883 481 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 PIGFQ07326 219 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 PTGR1Q14914 329 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 CDKL4Q5MAI5 379 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 RAB12Q6IQ22 244 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 LRRC25Q8N386 305 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 OR8K5Q8NH50 307 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 SPRYD4Q8WW59 207 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 CRB3Q9BUF7 120 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 TMEM5Q9Y2B1 443 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 CMAHPQ9Y471 501 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 YKT6O15498 198 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 HRH2P25021 359 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 GINS1Q14691 196 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 GRM7Q14831 915 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 MLC1Q15049 377 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 HORMAD2Q8N7B1 307 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 C1orf21Q9H246 121 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 TMEM185BQ9H7F4 350 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 NUFIP1Q9UHK0 495 aaKnown RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 LY75O60449 1722 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 H3BSA7 217 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 GFRA2O00451 464 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 CKMT1AP12532 417 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 S1PR1P21453 382 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 TMEM35AQ53FP2 167 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 PSAPL1Q6NUJ1 521 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 WDR20Q8TBZ3 569 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 A0A1B0GUL6 1792 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 HSD3B2P26439 372 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 RORAP35398 523 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 ATXN7L3Q14CW9 347 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 NADK2Q4G0N4 442 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 MEN1O00255 615 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 LINC01565O15544 149 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 ATE1O95260 518 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 SRFP11831 508 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 PEPDP12955 493 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 MAPK3P27361 379 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 MALLQ13021 153 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 RBM39Q14498 530 aaKnown RBP13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 TMEM236Q5W0B7 351 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 LRFN4Q6PJG9 635 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 ARSKQ6UWY0 536 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 MOAP1Q96BY2 351 aa13.57□□□□□ -0.24
PCDHA11-201ENST00000398640 ABLIM3O94929 683 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC15A1P46059 708 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 BBS10Q8TAM1 723 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 NAT6Q93015 286 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms