RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 MAT2BQ9NZL9 334 aa23.52■■□□□ 1.36
TSPAN4-207ENST00000397411 SH3BP4Q9P0V3 963 aa23.52■■□□□ 1.36
TSPAN4-207ENST00000397411 TMEM200CA6NKL6 621 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 PYCARD-AS1I3L0S3 204 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 SASH3O75995 380 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 RASAL1O95294 804 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 SP1P08047 785 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 KITP10721 976 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 PRPS2P11908 318 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 NCBP2P52298 156 aaKnown RBP eCLIP23.51■■□□□ 1.358e-7■■■□□ 17.1
TSPAN4-207ENST00000397411 PPP2R2AP63151 447 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 DUSP2Q05923 314 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 LTB4RQ15722 352 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 PIGGQ5H8A4 983 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 OPN5Q6U736 354 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 FAM180AQ6UWF9 173 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 GPALPP1Q8IXQ4 340 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 PPCDCQ96CD2 204 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 NUF2Q9BZD4 464 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 ASF1BQ9NVP2 202 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 HAO1Q9UJM8 370 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 CFL2Q9Y281 166 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 ZNF462Q96JM2 2506 aa23.51■■□□□ 1.35
TSPAN4-207ENST00000397411 VPS4BO75351 444 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 SLC25A12O75746 678 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 HPCAL1P37235 193 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 EXOSC7Q15024 291 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 MPEG1Q2M385 716 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 R3HCC1LQ7Z5L2 792 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 FAM98AQ8NCA5 519 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 OR9A2Q8NGT5 310 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 LRRC8CQ8TDW0 803 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 KAT2AQ92830 837 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 WWTR1Q9GZV5 400 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 AKTIPQ9H8T0 292 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 TAS2R7Q9NYW3 318 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 VPS4AQ9UN37 437 aa23.5■■□□□ 1.35
TSPAN4-207ENST00000397411 MYO1GB0I1T2 1018 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 SNNO75324 88 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 BCAS2O75934 225 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 NEURL1O76050 574 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 JUNP05412 331 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 PCSK2P16519 638 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 RPL3P39023 403 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 SOX3P41225 446 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 EMX2Q04743 252 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 MGAT2Q10469 447 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 TRMT12Q53H54 448 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 ANKRD26P1Q6NSI1 321 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 TAGAPQ8N103 731 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 ZNF615Q8N8J6 731 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 GRHL3Q8TE85 626 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 TRIM45Q9H8W5 580 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 TIMMDC1Q9NPL8 285 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 INTS9Q9NV88 658 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 MARCOQ9UEW3 520 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 PRODH2Q9UF12 536 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 EXO1Q9UQ84 846 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 PCDHGB6Q9Y5F9 930 aa23.49■■□□□ 1.35
TSPAN4-207ENST00000397411 SLCO1B7G3V0H7 640 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 OR6B1O95007 311 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 NR0B1P51843 470 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 MRPS35P82673 323 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 EBPQ15125 230 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 INAQ16352 499 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 PRSS53Q2L4Q9 553 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 GALNTL5Q7Z4T8 443 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 SLC15A4Q8N697 577 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 BCORP1Q8N888 145 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 OR52R1Q8NGF1 315 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 ZNF675Q8TD23 568 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 MIB2Q96AX9 1013 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 MTERF3Q96E29 417 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 PRPF18Q99633 342 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 HES7Q9BYE0 225 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 NOP53Q9NZM5 478 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 CFAP46Q8IYW2 2715 aa23.48■■□□□ 1.35
TSPAN4-207ENST00000397411 SMG1Q96Q15 3661 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 TRPC5OSA6NMA1 111 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 KLF11O14901 512 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 PDPK1O15530 556 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 CRYABP02511 175 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 CLPSP04118 112 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 S1PR1P21453 382 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 FOXK1P85037 733 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 SMU1Q2TAY7 513 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 ZNF628Q5EBL2 1059 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 TP53INP1Q96A56 240 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 SCMH1Q96GD3 660 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 ZNF639Q9UID6 485 aa23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 KLF13Q9Y2Y9 288 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-207ENST00000397411 HDAC3O15379 428 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 LBPP18428 481 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 GPC1P35052 558 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 NRG3P56975 720 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 CEBPEQ15744 281 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 RTL4Q6ZR62 310 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 DNAJB8Q8NHS0 232 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 C16orf52Q8NHV5 167 aa23.46■■□□□ 1.35
TSPAN4-207ENST00000397411 ZFP28Q8NHY6 868 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms