RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 EFNA3P52797 238 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 SKP1P63208 163 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 EMX2Q04743 252 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 TFF3Q07654 80 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 OR1C1Q15619 314 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 EXT1Q16394 746 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 SMU1Q2TAY7 513 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 RFTN2Q52LD8 501 aaPredicted RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 NOXRED1Q6NXP6 359 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 CPEB2Q7Z5Q1 589 aaKnown RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 NUDT13Q86X67 352 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 LIX1Q8N485 282 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 CHDHQ8NE62 594 aaPredicted RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 M1APQ8TC57 530 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 UTP15Q8TED0 518 aaKnown RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 ASB5Q8WWX0 329 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 TBCDQ9BTW9 1192 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 YIPF2Q9BWQ6 316 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 SORBS1Q9BX66 1292 aaKnown RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 MMP25Q9NPA2 562 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 CCL27Q9Y4X3 112 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 A8MUI8 341 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 H0YIG0 161 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 B3GALT2O43825 422 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 CCDC22O60826 627 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 DCTN3O75935 186 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 B3GALT4O96024 378 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 PRPS2P11908 318 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 IL1RNP18510 177 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEC13-205ENST00000397101 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
SEC13-205ENST00000397101 AVPR1BP47901 424 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 NME5P56597 212 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 TBL3Q12788 808 aaKnown RBP12.72□□□□□ -0.37
SEC13-205ENST00000397101 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 HYAL2Q12891 473 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 HERC3Q15034 1050 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 DEFB134Q4QY38 66 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 SLC25A25Q6KCM7 469 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 TMEM214Q6NUQ4 689 aaKnown RBP12.72□□□□□ -0.37
SEC13-205ENST00000397101 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 DMRTC2Q8IXT2 367 aaPredicted RBP12.72□□□□□ -0.37
SEC13-205ENST00000397101 STON2Q8WXE9 905 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
SEC13-205ENST00000397101 VN1R1Q9GZP7 353 aa12.72□□□□□ -0.37
SEC13-205ENST00000397101 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 EEDO75530 441 aaKnown RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 NEURL1O76050 574 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 TBX6O95947 436 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 SP1P08047 785 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 IDO1P14902 403 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 ATP5A1P25705 553 aaKnown RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 MSX1P28360 303 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 MAPK12P53778 367 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 MTTPP55157 894 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 FOLH1Q04609 750 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SLAMF1Q13291 335 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 GSTA3Q16772 222 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 ADPRMQ3LIE5 342 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 TMEM211Q6ICI0 200 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SPINK14Q6IE38 97 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 OGFOD2Q6N063 350 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 GALNTL5Q7Z4T8 443 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 UBE3DQ7Z6J8 389 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 MTDHQ86UE4 582 aaKnown RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 MMP21Q8N119 569 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 POGLUT1Q8NBL1 392 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 LILRB4Q8NHJ6 448 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 TSSK3Q96PN8 268 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SERINC2Q96SA4 455 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 ZBTB18Q99592 522 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 NPAS2Q99743 824 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 HES7Q9BYE0 225 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 AICDAQ9GZX7 198 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 TSPAN10Q9H1Z9 355 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SEC13-205ENST00000397101 KLHL1Q9NR64 748 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 BAIAP2L1Q9UHR4 511 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 MCM8Q9UJA3 840 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 ADAM29Q9UKF5 820 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 FBXW2Q9UKT8 454 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 NAALAD2Q9Y3Q0 740 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SLC22A7Q9Y694 548 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
SEC13-205ENST00000397101 SCN2AQ99250 2005 aa12.71□□□□□ -0.38
SEC13-205ENST00000397101 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
SEC13-205ENST00000397101 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
SEC13-205ENST00000397101 SGK494L7N484 410 aa12.7□□□□□ -0.38
SEC13-205ENST00000397101 FCHO1O14526 889 aa12.7□□□□□ -0.38
SEC13-205ENST00000397101 GUCY1B2O75343 617 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms