RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 SORBS2O94875 1100 aaKnown RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 CCNYL3P0C7X3 344 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PGM1P36871 562 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 CCT3P49368 545 aaKnown RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PRKAG1P54619 331 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 EMP2P54851 167 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 MGAT2Q10469 447 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ZNF155Q12901 538 aaPredicted RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 DUSP8Q13202 625 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 CEACAM7Q14002 265 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 COX20Q5RI15 118 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 RNF130Q86XS8 419 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PLPP5Q8NEB5 264 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 OR56A1Q8NGH5 318 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 RIT1Q92963 219 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 UTP4Q969X6 686 aaKnown RBP13.16□□□□□ -0.3
GAPDH-203ENST00000396858 C8orf44Q96CB5 159 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 NEURL3Q96EH8 262 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 CDRT15Q96T59 188 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 B3GNT4Q9C0J1 378 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PIF1Q9H611 641 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 EPS8L2Q9H6S3 715 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 ERVK-19Q9WJR5 959 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 L3MBTL1Q9Y468 752 aa13.16□□□□□ -0.3
GAPDH-203ENST00000396858 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 C17orf105B2RV13 164 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 UPK1AO00322 258 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 PLOD2O00469 737 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 GSC2O15499 205 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 EMC8O43402 210 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 KLF7O75840 302 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 CBX7O95931 251 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 TNNI3P19429 210 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 TCN1P20061 433 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 TCN2P20062 427 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 CD82P27701 267 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 SSTR4P31391 388 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 SOX11P35716 441 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 DLSTP36957 453 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 MVDP53602 400 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 OR4D2P58180 307 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 PRR5P85299 388 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 LIPEQ05469 1076 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 LASP1Q14847 261 aaKnown RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 SFT2D3Q587I9 215 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 TNFAIP8L2Q6P589 184 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 WDR53Q7Z5U6 358 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 FAM156AQ8NDB6 213 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 NUP43Q8NFH3 380 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 OR52R1Q8NGF1 315 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 OR2Y1Q8NGV0 311 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 METTL21AQ8WXB1 218 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 MOAP1Q96BY2 351 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 THUMPD3Q9BV44 507 aaKnown RBP13.15□□□□□ -0.3
GAPDH-203ENST00000396858 NRSN2Q9GZP1 204 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 C3orf14Q9HBI5 128 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 THSD1Q9NS62 852 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
GAPDH-203ENST00000396858 SEC16AO15027 2179 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 A0A087WV62 115 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 EVPLLA8MZ36 301 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 FAM220BPB1ANY3 271 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
GAPDH-203ENST00000396858 DXOO77932 396 aaKnown RBP13.14□□□□□ -0.31
GAPDH-203ENST00000396858 SEC24DO94855 1032 aaPredicted RBP13.14□□□□□ -0.31
GAPDH-203ENST00000396858 SLITRK5O94991 958 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 PSMG1O95456 288 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 KRT75O95678 551 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 CLPSP04118 112 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 NUDT7P0C024 238 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 ETFAP13804 333 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
GAPDH-203ENST00000396858 CRATP43155 626 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 GSK3BP49841 420 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 KHKP50053 298 aa13.14□□□□□ -0.31
GAPDH-203ENST00000396858 EEFSECP57772 596 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms