RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 OR2T4Q8NH00 348 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZFAND2BQ8WV99 257 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF395Q9H8N7 513 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TREM1Q9NP99 234 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ENAMQ9NRM1 1142 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 GPR34Q9UPC5 381 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ICKQ9UPZ9 632 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 BORCS7-ASMTA0A0B4J1R7 106 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 M0R036 132 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 POLR1CO15160 346 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CREBL2O60519 120 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CDK2P24941 298 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RGS19P49795 217 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ACTBP60709 375 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ACTG1P63261 375 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SLC22A10Q63ZE4 541 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF852Q6ZMS4 543 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LHFPL3Q86UP9 236 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 GALNT12Q8IXK2 581 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KLHDC8AQ8IYD2 350 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TANKQ92844 425 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TGM7Q96PF1 710 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 BCL7BQ9BQE9 202 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM168Q9H0V1 697 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 UBQLN2Q9UHD9 624 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KCTD3Q9Y597 815 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SLC35E2BP0CK96 405 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 C6P13671 934 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SFT2D3Q587I9 215 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RAET1LQ5VY80 246 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 C1orf94Q6P1W5 598 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KCTD9Q7L273 389 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 MS4A15Q8N5U1 240 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 OR8S1Q8NH09 359 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SPTSSAQ969W0 71 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RHBDF1Q96CC6 855 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LGALS12Q96DT0 336 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 FBXL20Q96IG2 436 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 BIRC8Q96P09 236 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SYT3Q9BQG1 590 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 UBL4AP11441 157 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PRKACGP22612 351 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 S100PP25815 95 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 AK4P27144 223 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SLC6A8P48029 635 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CRISP1P54107 249 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CDH15P55291 814 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 DLX2Q07687 328 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RAB33AQ14088 237 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CYP27C1Q4G0S4 372 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SIAH1Q8IUQ4 282 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 NANOS1Q8WY41 292 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PCYT2Q99447 389 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 WDR37Q9Y2I8 494 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LOC100509620A0A075B734 347 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 IFNA2P01563 188 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 BPIP17213 487 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 NPR2P20594 1047 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PTGS2P35354 604 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RBMXP38159 391 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CYCSP99999 105 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 EFR3AQ14156 821 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ARL6IP1Q15041 203 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 C15orf39Q6ZRI6 1047 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TAS1R3Q7RTX0 852 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KRTCAP2Q8N6L1 136 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SLC6A16Q9GZN6 736 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZDHHC7Q9NXF8 308 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ADAM18Q9Y3Q7 739 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SPO11Q9Y5K1 396 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 UNC119BA6NIH7 251 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 DIRAS3O95661 229 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 P04436 131 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CSF2RAP15509 400 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 NKX3-2P78367 333 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 C6orf141Q5SZD1 244 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 NDUFAF5Q5TEU4 345 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PM20D1Q6GTS8 502 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SERINC2Q96SA4 455 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MGLLQ99685 303 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SLC17A9Q9BYT1 436 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 RHCGQ9UBD6 479 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 POU2F3Q9UKI9 436 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ENTPD2Q9Y5L3 495 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SMCO3A2RU48 225 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MRPS14O60783 128 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 NUDT1P36639 197 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 S100A12P80511 92 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CRYZQ08257 329 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SLC14A2Q15849 920 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CTC1Q2NKJ3 1217 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 LCN8Q6JVE9 175 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SLC39A5Q6ZMH5 540 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 RPS27LQ71UM5 84 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 COQ8AQ8NI60 647 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SFXN5Q8TD22 340 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 IGSF8Q969P0 613 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CHFRQ96EP1 664 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms