RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 OR2A2Q6IF42 318 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF793Q6ZN11 406 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 IL17RELQ6ZVW7 336 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 TMPRSS11BQ86T26 416 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 CNEP1R1Q8N9A8 125 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 SMAP2Q8WU79 429 aaPredicted RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ATG4AQ8WYN0 398 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 REPS1Q96D71 796 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 ZMYND19Q96E35 227 aaPredicted RBP12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 GAL3ST4Q96RP7 486 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 MAPKAP1Q9BPZ7 522 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC35F4A4IF30 521 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 GNB5O14775 395 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 CLEC3AO75596 197 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 COMPP49747 757 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 CLDN15P56746 228 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 SPRED3Q2MJR0 410 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 CASC4Q6P4E1 433 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 PEX26Q7Z412 305 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 UBE3DQ7Z6J8 389 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC35F6Q8N357 371 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 WDSUB1Q8N9V3 476 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 OR1J4Q8NGS1 313 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 FBXW5Q969U6 566 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 TP53INP1Q96A56 240 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF845Q96IR2 970 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 LCORQ96JN0 433 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 RHNO1Q9BSD3 238 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 REXO4Q9GZR2 422 aaKnown RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 BARX1Q9HBU1 254 aaPredicted RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 ARL15Q9NXU5 204 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 PTBP2Q9UKA9 531 aaKnown RBP12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 PLCE1Q9P212 2302 aa12.31□□□□□ -0.44
VCPKMT-201ENST00000395859 FAM234BA2RU67 622 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 GRID2IPA4D2P6 1211 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 OR6C76A6NM76 312 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 LIASO43766 372 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 IFNB1P01574 187 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 COX7A2P14406 83 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 GSTM2P28161 218 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 ARMC3Q5W041 872 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 PAQR3Q6TCH7 311 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 ANGPTL8Q6UXH0 198 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 TMIGD1Q6UXZ0 262 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC29A4Q7RTT9 530 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 DTX2Q86UW9 622 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 THOC6Q86W42 341 aaKnown RBP12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 OR4N5Q8IXE1 308 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 TAGAPQ8N103 731 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 RFLNBQ8N5W9 214 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 C7orf57Q8NEG2 295 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 TTLQ8NG68 377 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 NEUROG1Q92886 237 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 GTPBP3Q969Y2 492 aaKnown RBP12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 KRT12Q99456 494 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 KLHL4Q9C0H6 718 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
VCPKMT-201ENST00000395859 ZCWPW2A0A1B0GU75 182 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 CAPN14A8MX76 684 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 CDH16O75309 829 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HAUS5O94927 633 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SCELO95171 688 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ZSCAN5DPP0CG00 497 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 GCKP35557 465 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SLC1A2P43004 574 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 KCNJ5P48544 419 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HERVK_113P63132 956 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ERVK-8P63133 956 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 PCDH1Q08174 1060 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 GPS1Q13098 491 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 BCL2A1Q16548 175 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ADNP2Q6IQ32 1131 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 TRIM40Q6P9F5 258 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 RNF111Q6ZNA4 994 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 DOK4Q8TEW6 326 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 FIG4Q92562 907 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 ADIPOR1Q96A54 375 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 PBKQ96KB5 322 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HIST1H2AHQ96KK5 128 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 DGAT2Q96PD7 388 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 HIST1H2AJQ99878 128 aa12.29□□□□□ -0.44
VCPKMT-201ENST00000395859 H2AFJQ9BTM1 129 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms