RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 TM4SF18Q96CE8 201 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 ZG16BQ96DA0 208 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 CAMK1GQ96NX5 476 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 MVB12BQ9H7P6 319 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 KLHL28Q9NXS3 571 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 KLF15Q9UIH9 416 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 POU2F3Q9UKI9 436 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 POM121BA6NF01 834 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 CDRT1O95170 752 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 HOXB2P14652 356 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 ZNF12P17014 697 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 CPN2P22792 545 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 NCF4Q15080 339 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 FIGNL1Q6PIW4 674 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 C10orf53Q8N6V4 93 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 TRUB1Q8WWH5 349 aaKnown RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 HERVK_113Q902F9 699 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 FAM46AQ96IP4 442 aaKnown RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 TMED9Q9BVK6 235 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 P2RX2Q9UBL9 471 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 NDRG4Q9ULP0 352 aaKnown RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 NOX1Q9Y5S8 564 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 SPEGQ15772 3267 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 AP3D1O14617 1153 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 ADORA3P0DMS8 318 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 LIM2P55344 173 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 TGM3Q08188 693 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 FAM209AQ5JX71 171 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 MLIPQ5VWP3 458 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 GTF2IRD2BQ6EKJ0 949 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 C22orf42Q6IC83 251 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 KIAA1211LQ6NV74 962 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 GTF2IRD2Q86UP8 949 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 COQ10AQ96MF6 247 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 SPOCK3Q9BQ16 436 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 ACER3Q9NUN7 267 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 ASIC5Q9NY37 505 aa13.65□□□□□ -0.23
SREBF1-205ENST00000395757 YARS2Q9Y2Z4 477 aaKnown RBP13.65□□□□□ -0.23
SREBF1-205ENST00000395757 GPC6Q9Y625 555 aaPredicted RBP13.65□□□□□ -0.23
SREBF1-205ENST00000395757 FAM170BA6NMN3 283 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 NPC1O15118 1278 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 LDB3O75112 727 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 GKN3PP0CG01 181 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 ITGAMP11215 1152 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 PORP16435 677 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 DDCP20711 480 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 GABARAPL2P60520 117 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 RELAQ04206 551 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 IL18R1Q13478 541 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 SEC23BQ15437 767 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 OR4C11Q6IEV9 310 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 DNAJC22Q8N4W6 341 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 A0A1W2PPK0 400 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 OR2W5A6NFC9 320 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 MRPL3P09001 348 aaKnown RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 SAGP10523 405 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 PSMA1P25786 263 aaKnown RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 EIF2B5Q13144 721 aaKnown RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 ADGRF3Q8IZF5 1079 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 FBXL6Q8N531 539 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-205ENST00000395757 ASPNQ9BXN1 380 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 SLC35C2Q9NQQ7 365 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 KLHL42Q9P2K6 505 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 KCNE3Q9Y6H6 103 aa13.64□□□□□ -0.23
SREBF1-205ENST00000395757 HAT1O14929 419 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 LINC01565O15544 149 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 GCM2O75603 506 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-205ENST00000395757 GRK5P34947 590 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 PXNP49023 591 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-205ENST00000395757 KCNC4Q03721 635 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 FADDQ13158 208 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 KEAP1Q14145 624 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 FAM131AQ6UXB0 335 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 GALNT12Q8IXK2 581 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 ACOT4Q8N9L9 421 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 SCAIQ8N9R8 606 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 S100ZQ8WXG8 99 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 OR5P2Q8WZ92 322 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 ZNF707Q96C28 371 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-205ENST00000395757 GLIPR2Q9H4G4 154 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 IFT52Q9Y366 437 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 FAM25AB3EWG3 89 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 FAM25CB3EWG5 89 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 FAM25GB3EWG6 89 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 RNGTTO60942 597 aaKnown RBP13.63□□□□□ -0.23
SREBF1-205ENST00000395757 SOD1P00441 154 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 KRT8P05787 483 aa13.63□□□□□ -0.23
SREBF1-205ENST00000395757 CSNK2A2P19784 350 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms