RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 EPS8Q12929 822 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FXNQ16595 210 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ADPRMQ3LIE5 342 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTN4-205ENST00000394609 NDUFAF5Q5TEU4 345 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TMEM164Q5U3C3 297 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 BROXQ5VW32 411 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GPR107Q5VW38 600 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 NKAIN2Q5VXU1 208 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 LYSMD4Q5XG99 296 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GTF2IRD2BQ6EKJ0 949 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TRIM40Q6P9F5 258 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FAM92BQ6ZTR7 304 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 KCTD8Q6ZWB6 473 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GALNT10Q86SR1 603 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GTF2IRD2Q86UP8 949 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 IGFN1Q86VF2 1251 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CALHM3Q86XJ0 350 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PROSER1Q86XN7 944 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 MICU2Q8IYU8 434 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ADGRG5Q8IZF4 528 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PARP8Q8N3A8 854 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SLC15A4Q8N697 577 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FAM86B1Q8N7N1 296 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 BAHD1Q8TBE0 780 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 NETO1Q8TDF5 533 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 EDAQ92838 391 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 POP5Q969H6 163 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 NCLNQ969V3 563 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 MTERF3Q96E29 417 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 NSMCE2Q96MF7 247 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SP140LQ9H930 580 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FAM60AQ9NP50 221 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SLAMF7Q9NQ25 335 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FSCN3Q9NQT6 498 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 STARD5Q9NSY2 213 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SMPD3Q9NY59 655 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 MAGEL2Q9UJ55 1249 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ADAM29Q9UKF5 820 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PILRAQ9UKJ1 303 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 VPS4AQ9UN37 437 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TTC28Q96AY4 2481 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 NUP214P35658 2090 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 HEATR5BQ9P2D3 2071 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 FAM149AA5PLN7 773 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SLC9B1P1A6NJY1 282 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 M0QX08 132 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 KCNK5O95279 499 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 CTSBP07858 339 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SLC35G6P0C7Q6 338 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 HOXA6P31267 233 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SOAT1P35610 550 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 CRATP43155 626 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 FASLGP48023 281 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 MANFP55145 182 aaKnown RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 CDH15P55291 814 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 VSX2P58304 361 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 ARPC4P59998 168 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ADARB1P78563 741 aaKnown RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 RGS1Q08116 209 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 HSPB3Q12988 150 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 TOP3AQ13472 1001 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 ATP1A4Q13733 1029 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SLC5A12Q1EHB4 618 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 DEFB110Q30KQ9 67 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ZNF750Q32MQ0 723 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 DEFB134Q4QY38 66 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 COX20Q5RI15 118 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ZNF362Q5T0B9 420 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 C18orf63Q68DL7 685 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ANKRD13BQ86YJ7 626 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 C1orf210Q8IVY1 113 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
RTN4-205ENST00000394609 MAML2Q8IZL2 1156 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SLC25A45Q8N413 288 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 CBR4Q8N4T8 237 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 OR10Q1Q8NGQ4 319 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 FBXO30Q8TB52 745 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 UTP15Q8TED0 518 aaKnown RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 ZFP90Q8TF47 636 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 MAL2Q969L2 176 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 FAM162AQ96A26 154 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 RERGQ96A58 199 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 TM4SF19Q96DZ7 209 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SH3YL1Q96HL8 342 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 REXO5Q96IC2 774 aaKnown RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 ZFYVE21Q9BQ24 234 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SLC35A5Q9BS91 424 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 IER2Q9BTL4 223 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 TPK1Q9H3S4 243 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 AKIP1Q9NQ31 210 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 GPATCH2Q9NW75 528 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 TAS2R9Q9NYW1 312 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 RAPGEFL1Q9UHV5 662 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 DAPK2Q9UIK4 370 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ANAPC2Q9UJX6 822 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 POMT2Q9UKY4 750 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms