RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 FOXS1O43638 330 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 SLC28A2O43868 658 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 HS6ST1O60243 411 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 RDH16O75452 317 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 DNAJB5O75953 348 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 H6PDO95479 791 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 ATP1B1P05026 303 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 NELFEP18615 380 aaKnown RBP14.04□□□□□ -0.16
CCT4-201ENST00000394440 RRM2P31350 389 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 XCR1P46094 333 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 ARHGDIAP52565 204 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
CCT4-201ENST00000394440 RFX4Q33E94 735 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 ZNF628Q5EBL2 1059 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 OFCC1Q8IZS5 231 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
CCT4-201ENST00000394440 OR7D2Q96RA2 312 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 YIPF4Q9BSR8 244 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 FAM118AQ9NWS6 357 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 PLCL2Q9UPR0 1127 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 PCDHGB3Q9Y5G1 929 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
CCT4-201ENST00000394440 TMEM247A6NEH6 219 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 FESP07332 822 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 CHRM4P08173 479 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PORP16435 677 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 ITGA2P17301 1181 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PPP2R1BP30154 601 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PIGAP37287 484 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 KCNJ5P48544 419 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 DHPSP49366 369 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 DAPP51397 102 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 CRISP3P54108 245 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 KCNAB2Q13303 367 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 FHL5Q5TD97 284 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 NKAIN2Q5VXU1 208 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 MAML2Q8IZL2 1156 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 OR4C15Q8NGM1 316 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 BBS10Q8TAM1 723 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 TANKQ92844 425 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 SH3GLB1Q9Y371 365 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 KCNE3Q9Y6H6 103 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 ENPP4Q9Y6X5 453 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 TRIM64A6NGJ6 449 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 FAM227AF5H4B4 570 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 LDB3O75112 727 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 GPR75O95800 540 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 IFI6P09912 130 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 NR2F1P10589 423 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 GLB1P16278 677 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 KCNC4Q03721 635 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 FAM53BQ14153 422 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 TTC23Q5W5X9 447 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 FAHD1Q6P587 224 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 KANSL1Q7Z3B3 1105 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 NCSTNQ92542 709 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 ZDHHC12Q96GR4 267 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 MS4A4EQ96PG1 132 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 ZNF607Q96SK3 696 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 EPB41L1Q9H4G0 881 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 ENAMQ9NRM1 1142 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 DDX18Q9NVP1 670 aaKnown RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 PDP1Q9P0J1 537 aaPredicted RBP14.03□□□□□ -0.16
CCT4-201ENST00000394440 PTGFRNQ9P2B2 879 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 PILRBQ9UKJ0 227 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 MYRFQ9Y2G1 1151 aa14.03□□□□□ -0.16
CCT4-201ENST00000394440 ETS2P15036 469 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 ALDH4A1P30038 563 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 ARRB1P49407 418 aaPredicted RBP14.02□□□□□ -0.16
CCT4-201ENST00000394440 RAD23AP54725 363 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 OR1D5P58170 312 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 CFHR1Q03591 330 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 EXOSC6Q5RKV6 272 aaKnown RBP14.02□□□□□ -0.16
CCT4-201ENST00000394440 MFSD12Q6NUT3 480 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 APLFQ8IW19 511 aaPredicted RBP14.02□□□□□ -0.16
CCT4-201ENST00000394440 CARFQ8N187 725 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 RASSF5Q8WWW0 418 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 GAB3Q8WWW8 586 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 COL26A1Q96A83 441 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 ANKRD9Q96BM1 317 aaPredicted RBP14.02□□□□□ -0.16
CCT4-201ENST00000394440 MUS81Q96NY9 551 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 COL21A1Q96P44 957 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 BTBD2Q9BX70 525 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 ACTRT3Q9BYD9 372 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 PDE7BQ9NP56 450 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 EXD2Q9NVH0 621 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 TESMINQ9Y4I5 508 aa14.02□□□□□ -0.16
CCT4-201ENST00000394440 DSPPQ9NZW4 1301 aa14.02□□□□□ -0.17
CCT4-201ENST00000394440 FITM1A5D6W6 292 aa14.02□□□□□ -0.17
CCT4-201ENST00000394440 PRR33A8MZF0 331 aa14.02□□□□□ -0.17
CCT4-201ENST00000394440 CHST10O43529 356 aa14.02□□□□□ -0.17
CCT4-201ENST00000394440 NSA2O95478 260 aaKnown RBP14.02□□□□□ -0.17
CCT4-201ENST00000394440 ZBTB11O95625 1053 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms