RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 USP22Q9UPT9 525 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 UPK1AO00322 258 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 CCNYL3P0C7X3 344 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 GPX2P18283 190 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 TCN1P20061 433 aaPredicted RBP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 SDHBP21912 280 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 SLC5A2P31639 672 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 MSX2P35548 267 aaPredicted RBP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 PRKAG1P54619 331 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 BIKQ13323 160 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 COX20Q5RI15 118 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 FHL5Q5TD97 284 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 RNF130Q86XS8 419 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 GALNT12Q8IXK2 581 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 SIMC1Q8NDZ2 872 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 RIT1Q92963 219 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 CCDC124Q96CT7 223 aaKnown RBP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 ZNF583Q96ND8 569 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 SLC46A1Q96NT5 459 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 B3GNT4Q9C0J1 378 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 PNO1Q9NRX1 252 aaKnown RBP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 DDX18Q9NVP1 670 aaKnown RBP22.69■■□□□ 1.22
LRFN4-202ENST00000393952 C3orf18Q9UK00 162 aa22.69■■□□□ 1.22
LRFN4-202ENST00000393952 EMP2P54851 167 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 RPS26P62854 115 aaKnown RBP22.68■■□□□ 1.22
LRFN4-202ENST00000393952 MAP4K2Q12851 820 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 RGNQ15493 299 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 FAM69BQ5VUD6 431 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 LANCL3Q6ZV70 420 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 OR2L13Q8N349 312 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 NUP43Q8NFH3 380 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 OR56A1Q8NGH5 318 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 OR52N2Q8NGI0 321 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 MOAP1Q96BY2 351 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 CRB3Q9BUF7 120 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 ALG2Q9H553 416 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 PTGFRNQ9P2B2 879 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 NXT1Q9UKK6 140 aaKnown RBP22.68■■□□□ 1.22
LRFN4-202ENST00000393952 AP3M1Q9Y2T2 418 aa22.68■■□□□ 1.22
LRFN4-202ENST00000393952 A8MUA0 341 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 SLITRK5O94991 958 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 TNNI3P19429 210 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 ME2P23368 584 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 PRR5P85299 388 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 CALHM3Q86XJ0 350 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 VWA5B2Q8N398 1253 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 CT55Q8WUE5 264 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 CTHRC1Q96CG8 243 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 SLC35G5Q96KT7 338 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 NTMQ9P121 344 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 C19orf53Q9UNZ5 99 aaPredicted RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 CORO2BQ9UQ03 480 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 HRKO00198 91 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 PLOD3O60568 738 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 ALOX12BO75342 701 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 HSD17B1P14061 328 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 RBMS1P29558 406 aaKnown RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 GALNSP34059 522 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 SOX11P35716 441 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 CRATP43155 626 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 GZMMP51124 257 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 ZNF267Q14586 743 aaPredicted RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 EXOSC7Q15024 291 aaKnown RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 C6orf163Q5TEZ5 329 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 ENDOVQ8N8Q3 282 aaKnown RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 PTPMT1Q8WUK0 201 aaPredicted RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 KCTD14Q9BQ13 255 aaPredicted RBP22.67■■□□□ 1.22
LRFN4-202ENST00000393952 SERHL2Q9H4I8 314 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 ADAP2Q9NPF8 381 aa22.67■■□□□ 1.22
LRFN4-202ENST00000393952 A0A087WV62 115 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 C17orf105B2RV13 164 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 NME6O75414 186 aaPredicted RBP22.66■■□□□ 1.22
LRFN4-202ENST00000393952 CBX7O95931 251 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 HMGN2P05204 90 aaKnown RBP22.66■■□□□ 1.22
LRFN4-202ENST00000393952 IFI6P09912 130 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 ETFAP13804 333 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 S1PR1P21453 382 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 PGDP52209 483 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 OR4D2P58180 307 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 VAC14Q08AM6 782 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 SPATS1Q496A3 300 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 BHLHB9Q6PI77 547 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 ESX1Q8N693 406 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 C7orf57Q8NEG2 295 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 MESP1Q9BRJ9 268 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 CNPPD1Q9BV87 410 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 RAD21L1Q9H4I0 556 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 EQTNQ9NQ60 294 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 ZNF639Q9UID6 485 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 PTRH2Q9Y3E5 179 aaKnown RBP22.66■■□□□ 1.22
LRFN4-202ENST00000393952 AHCTF1Q8WYP5 2266 aa22.66■■□□□ 1.22
LRFN4-202ENST00000393952 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 DNAJA2O60884 412 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 KLF7O75840 302 aaPredicted RBP22.65■■□□□ 1.22
LRFN4-202ENST00000393952 NUDT7P0C024 238 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 TCN2P20062 427 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 DMTNQ08495 405 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 MAP7Q14244 749 aa22.65■■□□□ 1.22
LRFN4-202ENST00000393952 LASP1Q14847 261 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms