RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RDH8Q9NYR8 311 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SPIN1Q9Y657 262 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 STON1Q9Y6Q2 735 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 DOCK6Q96HP0 2047 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CCR4P51679 360 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CRISP1P54107 249 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CDK3Q00526 305 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CDKN3Q16667 212 aa10□□□□□ -0.81
CALD1-203ENST00000393118 KIAA1161Q6NSJ0 714 aa10□□□□□ -0.81
CALD1-203ENST00000393118 LILRA6Q6PI73 481 aa10□□□□□ -0.81
CALD1-203ENST00000393118 WDR53Q7Z5U6 358 aaPredicted RBP10□□□□□ -0.81
CALD1-203ENST00000393118 PTOV1Q86YD1 416 aa10□□□□□ -0.81
CALD1-203ENST00000393118 OR4N5Q8IXE1 308 aa10□□□□□ -0.81
CALD1-203ENST00000393118 FAM217AQ8IXS0 508 aa10□□□□□ -0.81
CALD1-203ENST00000393118 LRRC17Q8N6Y2 441 aa10□□□□□ -0.81
CALD1-203ENST00000393118 GALNT11Q8NCW6 608 aa10□□□□□ -0.81
CALD1-203ENST00000393118 WDR20Q8TBZ3 569 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CHTF18Q8WVB6 975 aa10□□□□□ -0.81
CALD1-203ENST00000393118 DEDD2Q8WXF8 326 aa10□□□□□ -0.81
CALD1-203ENST00000393118 KLHL6Q8WZ60 621 aa10□□□□□ -0.81
CALD1-203ENST00000393118 DNASE1L2Q92874 299 aa10□□□□□ -0.81
CALD1-203ENST00000393118 MGLLQ99685 303 aa10□□□□□ -0.81
CALD1-203ENST00000393118 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
CALD1-203ENST00000393118 SPNS1Q9H2V7 528 aa10□□□□□ -0.81
CALD1-203ENST00000393118 ACOT13Q9NPJ3 140 aa10□□□□□ -0.81
CALD1-203ENST00000393118 QPCTLQ9NXS2 382 aa10□□□□□ -0.81
CALD1-203ENST00000393118 TAS2R16Q9NYV7 291 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CDH7Q9ULB5 785 aa10□□□□□ -0.81
CALD1-203ENST00000393118 GSTK1Q9Y2Q3 226 aa10□□□□□ -0.81
CALD1-203ENST00000393118 UPK1AO00322 258 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PCDHGA12O60330 932 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PRKRAO75569 313 aaKnown RBP10□□□□□ -0.81
CALD1-203ENST00000393118 SEC14L2O76054 403 aa10□□□□□ -0.81
CALD1-203ENST00000393118 TP53P04637 393 aaPredicted RBP10□□□□□ -0.81
CALD1-203ENST00000393118 ASGR2P07307 311 aa10□□□□□ -0.81
CALD1-203ENST00000393118 FURINP09958 794 aa10□□□□□ -0.81
CALD1-203ENST00000393118 ITGAMP11215 1152 aa10□□□□□ -0.81
CALD1-203ENST00000393118 BMP7P18075 431 aa10□□□□□ -0.81
CALD1-203ENST00000393118 RHCEP18577 417 aa10□□□□□ -0.81
CALD1-203ENST00000393118 P2RY2P41231 377 aa10□□□□□ -0.81
CALD1-203ENST00000393118 ZNF33BQ06732 778 aa10□□□□□ -0.81
CALD1-203ENST00000393118 ARTNQ5T4W7 220 aa10□□□□□ -0.81
CALD1-203ENST00000393118 STEAP3Q658P3 488 aa10□□□□□ -0.81
CALD1-203ENST00000393118 SLC9B2Q86UD5 537 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PDZD3Q86UT5 571 aa10□□□□□ -0.81
CALD1-203ENST00000393118 FAM46DQ8NEK8 389 aa10□□□□□ -0.81
CALD1-203ENST00000393118 TP53INP1Q96A56 240 aa10□□□□□ -0.81
CALD1-203ENST00000393118 NRTNQ99748 197 aa10□□□□□ -0.81
CALD1-203ENST00000393118 SLX1AQ9BQ83 275 aa10□□□□□ -0.81
CALD1-203ENST00000393118 TBC1D17Q9HA65 648 aa10□□□□□ -0.81
CALD1-203ENST00000393118 KRCC1Q9NPI7 259 aaPredicted RBP10□□□□□ -0.81
CALD1-203ENST00000393118 NDUFAF4Q9P032 175 aa10□□□□□ -0.81
CALD1-203ENST00000393118 SH2B3Q9UQQ2 575 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PRAMEF33A0A0G2JMD5 474 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CLCA1A8K7I4 914 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PRAMEF10O60809 474 aa10□□□□□ -0.81
CALD1-203ENST00000393118 ZNF10P21506 573 aaPredicted RBP10□□□□□ -0.81
CALD1-203ENST00000393118 STXBP1P61764 594 aaKnown RBP10□□□□□ -0.81
CALD1-203ENST00000393118 PTGES3Q15185 160 aaKnown RBP10□□□□□ -0.81
CALD1-203ENST00000393118 ZNF181Q2M3W8 571 aa10□□□□□ -0.81
CALD1-203ENST00000393118 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
CALD1-203ENST00000393118 HORMAD2Q8N7B1 307 aa10□□□□□ -0.81
CALD1-203ENST00000393118 MUL1Q969V5 352 aa10□□□□□ -0.81
CALD1-203ENST00000393118 DIRAS2Q96HU8 199 aa10□□□□□ -0.81
CALD1-203ENST00000393118 AIFM2Q9BRQ8 373 aa10□□□□□ -0.81
CALD1-203ENST00000393118 SPATA9Q9BWV2 254 aa10□□□□□ -0.81
CALD1-203ENST00000393118 KCNN3Q9UGI6 736 aa10□□□□□ -0.81
CALD1-203ENST00000393118 CASKO14936 926 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SLC16A6O15403 523 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 GREM1O60565 184 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SAGP10523 405 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 GINS1Q14691 196 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 UNC5DQ6UXZ4 953 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SPRED2Q7Z698 418 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SAMD11Q96NU1 681 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TBX5Q99593 518 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 OR51E2Q9H255 320 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 DPEP2Q9H4A9 486 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 CXorf36Q9H7Y0 433 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 IL20RAQ9UHF4 553 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 ACSL5Q9ULC5 683 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 RPL36Q9Y3U8 105 aaKnown RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 HSPE1-MOB4S4R3N1 261 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 IGLV3-16A0A075B6K0 115 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 ALPPP05187 535 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 S100A9P06702 114 aaKnown RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 HOXB2P14652 356 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 HPGDP15428 266 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SYPL1Q16563 259 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 ZNF776Q68DI1 518 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 KDM4DQ6B0I6 523 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 PNCKQ6P2M8 343 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 FAM83HQ6ZRV2 1179 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 TECPR1Q7Z6L1 1165 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 NOXA1Q86UR1 476 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 LAPTM4BQ86VI4 370 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 EPYCQ99645 322 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 ABCG4Q9H172 646 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 MMP28Q9H239 520 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms