RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PRKYO43930 277 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 MFSD11O43934 449 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 RAD1O60671 282 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 RGS9O75916 674 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 OR4F21O95013 312 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CST3P01034 146 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SYPP08247 313 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 HBQ1P09105 142 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 G6PDP11413 515 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PBLDP30039 288 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CCR7P32248 378 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 MNDAP41218 407 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SLC1A2P43004 574 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PITPNBP48739 271 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TAF6P49848 677 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 NDUFA6P56556 154 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 OR2B8PP59922 312 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 AIMP2Q13155 320 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 IRF3Q14653 427 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FAM189A2Q15884 450 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 BATFQ16520 125 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GCNT6Q5T4J0 391 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 COL13A1Q5TAT6 717 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FUT10Q6P4F1 479 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GPR149Q86SP6 731 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 RIMKLAQ8IXN7 391 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 BTN2A2Q8WVV5 523 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 EQTNQ9NQ60 294 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GAR1Q9NY12 217 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TAS2R13Q9NYV9 303 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TVP23BQ9NYZ1 205 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TSPAN16Q9UKR8 245 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ZFC3H1O60293 1989 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM82A0PJX8 343 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 M0QYT0 321 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DNASE2O00115 360 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ITGA10O75578 1167 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RECQL4O94761 1208 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ESR1P03372 595 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 C4BPAP04003 597 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CD3GP09693 182 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ARF4P18085 180 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 AGTR1P30556 359 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MAGEA6P43360 314 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RPS10P46783 165 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SLC6A3Q01959 620 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ABHD18Q0P651 414 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DDX39BQ13838 428 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 KIAA0141Q14154 515 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TECRLQ5HYJ1 363 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MANEALQ5VSG8 457 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 QSOX2Q6ZRP7 698 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF551Q7Z340 670 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CLEC14AQ86T13 490 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TGIF2LXQ8IUE1 241 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 THEM5Q8N1Q8 247 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 B3GALNT2Q8NCR0 500 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ST7LQ8TDW4 575 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ADAMTS19Q8TE59 1207 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CREB3L4Q8TEY5 395 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RRNAD1Q96FB5 475 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 WDFY2Q96P53 400 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MAPKAP1Q9BPZ7 522 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ENKD1Q9H0I2 346 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DCAF13Q9NV06 445 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MRPL15Q9P015 296 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CA14Q9ULX7 337 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 KCNMB2Q9Y691 235 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 V9GYH0 126 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 WNK3Q9BYP7 1800 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DDX60Q8IY21 1712 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CASTOR2A6NHX0 329 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 POP4O95707 220 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 EGFP01133 1207 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 PIGRP01833 764 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RPS2P15880 293 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 HOXB8P17481 243 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CELP19835 753 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SERPINF1P36955 418 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 PSEN2P49810 448 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RPS27AP62979 156 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 UBA52P62987 128 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 NKX6-1P78426 367 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DSC2Q02487 901 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RHEBQ15382 184 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF79Q15937 498 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DCAF4L1Q3SXM0 396 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 LRRC37A5PQ49AS3 106 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SPRYD7Q5W111 196 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SLC27A1Q6PCB7 646 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 B3GNT9Q6UX72 402 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF615Q8N8J6 731 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF383Q8NA42 475 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 GPR26Q8NDV2 337 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 OR52P1PQ8NH57 321 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms