RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 RAE1P78406 368 aaKnown RBP10.28□□□□□ -0.76
BRF1-204ENST00000392557 DBPQ10586 325 aaPredicted RBP10.28□□□□□ -0.76
BRF1-204ENST00000392557 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 REEP3Q6NUK4 255 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 TSEN54Q7Z6J9 526 aaKnown RBP10.28□□□□□ -0.76
BRF1-204ENST00000392557 GLCCI1Q86VQ1 547 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 LRR1Q96L50 414 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 FNDC11Q9BVV2 318 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 C11orf54Q9H0W9 315 aaPredicted RBP10.28□□□□□ -0.76
BRF1-204ENST00000392557 NKX2-4Q9H2Z4 354 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 SFXN1Q9H9B4 322 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 HHATLQ9HCP6 504 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 GPATCH2Q9NW75 528 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 SPATA6Q9NWH7 488 aaPredicted RBP10.28□□□□□ -0.76
BRF1-204ENST00000392557 KLHL42Q9P2K6 505 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 STUB1Q9UNE7 303 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 SH2B3Q9UQQ2 575 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 OR1A2Q9Y585 309 aa10.28□□□□□ -0.76
BRF1-204ENST00000392557 C1orf226A1L170 272 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 C1QTNF3-AMACRE9PGA6 284 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 RNASET2O00584 256 aaKnown RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 ADRA2AP08913 450 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 ALPPL2P10696 532 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 SLC2A2P11168 524 aaPredicted RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 HOXB9P17482 250 aaPredicted RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 MAT2AP31153 395 aaKnown RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 P2RY2P41231 377 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 ZNF91Q05481 1191 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 RUNX3Q13761 415 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 CDK10Q15131 360 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 SYT14Q8NB59 555 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 DOK4Q8TEW6 326 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 C16orf78Q8WTQ4 265 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 ASB15Q8WXK1 588 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 SLC9A6Q92581 669 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 TRIM63Q969Q1 353 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 NELL2Q99435 816 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 TMED9Q9BVK6 235 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 BARHL1Q9BZE3 327 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 SLC6A16Q9GZN6 736 aa10.27□□□□□ -0.76
BRF1-204ENST00000392557 TRIM45Q9H8W5 580 aaPredicted RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 PCYT1BQ9Y5K3 369 aaPredicted RBP10.27□□□□□ -0.76
BRF1-204ENST00000392557 SLC5A10A0PJK1 596 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 C5orf67F2Z3F1 127 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SLC16A5O15375 505 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 PAK4O96013 591 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 CXCR2P25025 360 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 HTR2BP41595 481 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 MLLT1Q03111 559 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 CRB2Q5IJ48 1285 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 TTC23LQ6PF05 361 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 VITQ6UXI7 678 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 LHFPL3Q86UP9 236 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 TMEM19Q96HH6 336 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SIGLEC11Q96RL6 698 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 SPATA9Q9BWV2 254 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 PLA2G2FQ9BZM2 168 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 NLKQ9UBE8 527 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SLC27A6Q9Y2P4 619 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 GRIP1Q9Y3R0 1128 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 A0A1W2PP55 124 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SH3D21A4FU49 640 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 M0R3H8 397 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SCG5P05408 212 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 RNF144AP50876 292 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 MAPK12P53778 367 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 ARPC4P59998 168 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 HOXC5Q00444 222 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 GINS1Q14691 196 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 LARS2Q15031 903 aaKnown RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 CDKL4Q5MAI5 379 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 RTL10Q7L3V2 364 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 ZNF438Q7Z4V0 828 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 PGBD3Q8N328 593 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 OR5AR1Q8NGP9 310 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 TRMT61AQ96FX7 289 aaKnown RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 COQ10AQ96MF6 247 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 KCTD7Q96MP8 289 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 SDHCQ99643 169 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 BHLHE41Q9C0J9 482 aaPredicted RBP10.27□□□□□ -0.77
BRF1-204ENST00000392557 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 ANKRA2Q9H9E1 313 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 PRSS16Q9NQE7 514 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 MAPRE3Q9UPY8 281 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 GSTK1Q9Y2Q3 226 aa10.27□□□□□ -0.77
BRF1-204ENST00000392557 TSPAN11A1L157 253 aa10.26□□□□□ -0.77
BRF1-204ENST00000392557 GSAPA4D1B5 854 aa10.26□□□□□ -0.77
BRF1-204ENST00000392557 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
BRF1-204ENST00000392557 ERAL1O75616 437 aaKnown RBP10.26□□□□□ -0.77
BRF1-204ENST00000392557 C1orf105O95561 183 aa10.26□□□□□ -0.77
BRF1-204ENST00000392557 SOD1P00441 154 aa10.26□□□□□ -0.77
BRF1-204ENST00000392557 OSMP13725 252 aa10.26□□□□□ -0.77
BRF1-204ENST00000392557 PRPH2P23942 346 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms