RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 DIO2Q92813 273 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 SARAFQ96BY9 339 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 OR10A5Q9H207 317 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 CNIH4Q9P003 139 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 SLC12A4Q9UP95 1085 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 KIAA1549Q9HCM3 1950 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 A8MT66 165 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 HCN1O60741 890 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 CPMP14384 443 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 GDF1P27539 372 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 GALNSP34059 522 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 SERPINB9P50453 376 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 DUSP2Q05923 314 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 GALNT1Q10472 559 aaPredicted RBP15.21■□□□□ 0.03
PTPRK-208ENST00000392449 FUT7Q11130 342 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 DUSP8Q13202 625 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 TSNAXIP1Q2TAA8 658 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 FAM111BQ6SJ93 734 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 SEM1Q6ZVN7 128 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 TAGAPQ8N103 731 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 METTL4Q8N3J2 472 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF483Q8TF39 744 aaPredicted RBP15.21■□□□□ 0.03
PTPRK-208ENST00000392449 ADIPOR1Q96A54 375 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 MRPL46Q9H2W6 279 aaKnown RBP15.21■□□□□ 0.03
PTPRK-208ENST00000392449 ELOVL6Q9H5J4 265 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF225Q9UK10 706 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 NPFFR2Q9Y5X5 522 aa15.21■□□□□ 0.03
PTPRK-208ENST00000392449 WDR1O75083 606 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TRIM3O75382 744 aaPredicted RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 KRT38O76015 456 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 S1PR1P21453 382 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 SOX18P35713 384 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 FEN1P39748 380 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ZFP36L2P47974 494 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 MAPK12P53778 367 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 DLX5P56178 289 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 EXOSC7Q15024 291 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 RPS6KA2Q15349 733 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 GGTA1PQ4G0N0 100 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TEX35Q5T0J7 233 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 FNDC7Q5VTL7 733 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 HLA-DQA1Q5Y7H0 255 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ADCY4Q8NFM4 1077 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 NEIL3Q8TAT5 605 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 NRGNQ92686 78 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ZNF597Q96LX8 424 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 RILPQ96NA2 401 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 MRPL57Q9BQC6 102 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 CES1P1Q9UKY3 287 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 C15orf38-AP3S2A0A0A6YYH1 394 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ERAL1O75616 437 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 OR4F21O95013 312 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 HOXD4P09016 255 aaPredicted RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 GPX3P22352 226 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 GCAP28676 217 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TBL3Q12788 808 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 LTB4RQ15722 352 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 WDR53Q7Z5U6 358 aaPredicted RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ULK2Q8IYT8 1036 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 DND1Q8IYX4 353 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 LIX1Q8N485 282 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 C1orf52Q8N6N3 182 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 SPPL2AQ8TCT8 520 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TRPC4APQ8TEL6 797 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 SELENOMQ8WWX9 145 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TP53INP1Q96A56 240 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 GNRHR2Q96P88 292 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 BRINP2Q9C0B6 783 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 NXF5Q9H1B4 397 aaKnown RBP15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ACKR4Q9NPB9 350 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 EHD3Q9NZN3 535 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 ADAM29Q9UKF5 820 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 TMCO1Q9UM00 188 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 PCDHA9Q9Y5H5 950 aa15.2■□□□□ 0.02
PTPRK-208ENST00000392449 SPG11Q96JI7 2443 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 MED12Q93074 2177 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 NME6O75414 186 aaPredicted RBP15.19■□□□□ 0.02
PTPRK-208ENST00000392449 TRAPPC6AO75865 159 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 OTCP00480 354 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 COL6A2P12110 1019 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 CHN1P15882 459 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 PORP16435 677 aaPredicted RBP15.19■□□□□ 0.02
PTPRK-208ENST00000392449 MGAT2Q10469 447 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 PRICKLE4Q2TBC4 344 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 TMEM198Q66K66 360 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 SLC48A1Q6P1K1 146 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 PAGE2Q7Z2X7 111 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 TMEM200AQ86VY9 491 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 VWA5B2Q8N398 1253 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 CDYL2Q8N8U2 506 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 NAXEQ8NCW5 288 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 TM4SF18Q96CE8 201 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 ITPAQ9BY32 194 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 ANKRA2Q9H9E1 313 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 AHSPQ9NZD4 102 aa15.19■□□□□ 0.02
PTPRK-208ENST00000392449 MAT2BQ9NZL9 334 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms