RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PLXDC1Q8IUK5 500 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC44A2Q8IWA5 706 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR4N5Q8IXE1 308 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR2L13Q8N349 312 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SMYD1Q8NB12 490 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR7G2Q8NG99 324 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 BBS10Q8TAM1 723 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CYGBQ8WWM9 190 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 KAT2AQ92830 837 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 MS4A4EQ96PG1 132 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 EPYCQ99645 322 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 DUSP23Q9BVJ7 150 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF696Q9H7X3 374 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SMURF2Q9HAU4 748 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CLK4Q9HAZ1 481 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PNPLA3Q9NST1 481 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PDP2Q9P2J9 529 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 A0A1B0GTQ1 180 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 HYKKA2RU49 373 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRAMEF25A6NGN4 478 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADAMDEC1O15204 470 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 CHST10O43529 356 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 FOXS1O43638 330 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 MED26O95402 600 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 NSA2O95478 260 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 GNAO1P09471 354 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 NR2F1P10589 423 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 EMP3P54852 163 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 FUT5Q11128 374 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 DUSP7Q16829 419 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 RFX4Q33E94 735 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF628Q5EBL2 1059 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 USP51Q70EK9 711 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 CEP68Q76N32 757 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADAMTS18Q8TE60 1221 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 APOBEC4Q8WW27 367 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 COL26A1Q96A83 441 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 C16orf58Q96GQ5 468 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR7D2Q96RA2 312 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF300Q96RE9 604 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ACTRT3Q9BYD9 372 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 DDX18Q9NVP1 670 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 SEMA5BQ9P283 1151 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 CLCA2Q9UQC9 943 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 SAMHD1Q9Y3Z3 626 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 PCDHGB3Q9Y5G1 929 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPC6Q9Y625 555 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 MN1Q10571 1320 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 A0A0A6YYC8 382 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 BLACEA4D250 179 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 A6NHS1 94 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 I3L1I5 382 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 B4GAT1O43505 415 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 LDB3O75112 727 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 SERPINB7O75635 380 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 TNFRSF1BP20333 461 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR1E2P47887 323 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCNC4Q03721 635 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM111BQ6SJ93 734 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 KRT73Q86Y46 540 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ST13P4Q8IZP2 240 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 SHISA5Q8N114 240 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF675Q8TD23 568 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZC3H10Q96K80 434 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 BTBD2Q9BX70 525 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 RUBCNLQ9H714 662 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 C3orf18Q9UK00 162 aa10.74□□□□□ -0.69
SMARCAL1-203ENST00000392128 CABIN1Q9Y6J0 2220 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 A0A087WV62 115 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HRO43593 1189 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 SMNDC1O75940 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 DNAJB5O75953 348 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 RECKO95980 971 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 FESP07332 822 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 RNH1P13489 461 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ETS2P15036 469 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRKACGP22612 351 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 RRM2P31350 389 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 SOX18P35713 384 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 XCR1P46094 333 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCNJ5P48544 419 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HSD11B2P80365 405 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CFHR1Q03591 330 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 FHL5Q5TD97 284 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 MFSD12Q6NUT3 480 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CDC73Q6P1J9 531 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 WDR74Q6RFH5 385 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR6C4Q8NGE1 309 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ANKRD9Q96BM1 317 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 FBXL20Q96IG2 436 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 NECAB3Q96P71 396 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 TOR3AQ9H497 397 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ANKRA2Q9H9E1 313 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 EXD2Q9NVH0 621 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 KLHL3Q9UH77 587 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEFF2Q9UIK5 374 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 C19orf53Q9UNZ5 99 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 LIPT1Q9Y234 373 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms