RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 THSD1Q9NS62 852 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FLVCR2Q9UPI3 526 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MYO7AQ13402 2215 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 GNB5O14775 395 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ATG12O94817 140 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FARS2O95363 451 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 OSMP13725 252 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ITGA3P26006 1051 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SOX18P35713 384 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 RETSATQ6NUM9 610 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CRTC1Q6UUV9 634 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SLC22A8Q8TCC7 542 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 GTF3C2Q8WUA4 911 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 GCDHQ92947 438 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ACBD6Q9BR61 282 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SCPEP1Q9HB40 452 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 V9GYH0 126 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PRAMEF11O60813 436 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 JUPP14923 745 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CXCL3P19876 107 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PREPP48147 710 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 GPR17Q13304 367 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ZNF234Q14588 700 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SLC14A2Q15849 920 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SSX6Q7RTT6 188 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MS4A15Q8N5U1 240 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PROKR2Q8NFJ6 384 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SEC22CQ9BRL7 303 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 QRSL1Q9H0R6 528 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CCDC88CQ9P219 2028 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 hCG_1807616A0A1W2PRN6 198 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PTGESO14684 152 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MMP20O60882 483 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 EPOP01588 193 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TCRBP04435 133 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 EPHX1P07099 455 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CFL1P23528 166 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PYCR1P32322 319 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ETV5P41161 510 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ETV6P41212 452 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PITPNBP48739 271 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ZNF551Q7Z340 670 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 RBM45Q8IUH3 476 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TMEM185AQ8NFB2 350 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 OR4M1Q8NGD0 313 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FAM124BQ9H5Z6 455 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MARK1Q9P0L2 795 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ACSL5Q9ULC5 683 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TLR6Q9Y2C9 796 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FKBP7Q9Y680 259 aa16.16■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MAP1BP46821 2468 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CKAP5Q14008 2032 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 OR14I1A6ND48 311 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 K7ERQ8 282 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 PSEN2P49810 448 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FAM171BQ6P995 826 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 RDH10Q8IZV5 341 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 OR52L1Q8NGH7 329 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ZCCHC3Q9NUD5 404 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TRPS1Q9UHF7 1281 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 RGS8P57771 180 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 GLRX5Q86SX6 157 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TTC9BQ8N6N2 239 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SDHCQ99643 169 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TRMT61BQ9BVS5 477 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TAS2R10Q9NYW0 307 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MN1Q10571 1320 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MMP3P08254 477 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CTRB1P17538 263 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 HK1P19367 917 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 ELK1P19419 428 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SHC1P29353 583 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CORO1AP31146 461 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 UBE2MP61081 183 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 HBA1P69905 142 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FGL1Q08830 312 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 MLLT11Q13015 90 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CTRB2Q6GPI1 263 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SBSNQ6UWP8 590 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 SPRYD4Q8WW59 207 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 FOXJ1Q92949 421 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 RFKQ969G6 155 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 TMEM175Q9BSA9 504 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 CPNE7Q9UBL6 633 aa16.15■□□□□ 0.18
TRAF3IP1-202ENST00000391993 LRRN3E7EW58 273 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GTPBP1O00178 669 aaKnown RBP16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ALDH1A1P00352 501 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 BDKRB1P46663 353 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 VEGFCP49767 419 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CEBPGP53567 150 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GPR85P60893 370 aa16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SLBPQ14493 270 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TAF13Q15543 124 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms