RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 KRT3P12035 628 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 MYL6BP14649 208 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 CRKLP46109 303 aaKnown RBP-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 POU3F4P49335 361 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 CEACAM7Q14002 265 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 KRT31Q15323 416 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 DCST2Q5T1A1 773 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 C6orf163Q5TEZ5 329 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 RNF165Q6ZSG1 346 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TMEM26Q6ZUK4 368 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 PRSS48Q7RTY5 328 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 APCDD1Q8J025 514 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TTC39CQ8N584 583 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 GVQW1Q8N7I0 195 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TSPAN14Q8NG11 270 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 SLC26A7Q8TE54 656 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TAF4BQ92750 862 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 SPATA33Q96N06 139 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 PSMD1Q99460 953 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 ARPC5LQ9BPX5 153 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TSSK1BQ9BXA7 367 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TRIM9Q9C026 710 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 CNOT10Q9H9A5 744 aaKnown RBP-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 LHX9Q9NQ69 397 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 TMOD3Q9NYL9 352 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 CIDEBQ9UHD4 219 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 KLK4Q9Y5K2 254 aa-0.18□□□□□ -2.44
SNORA40-201ENST00000388090 LAMB2P55268 1798 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 CACNA1DQ01668 2161 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 TUBGCP6Q96RT7 1819 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 A0A1B0GW55 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 J3QRE1 110 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 SPAG7O75391 227 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 LETM1O95202 739 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 SLC25A27O95847 323 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 NUDT14O95848 222 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 WNT2P09544 360 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L2P0CJ85 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L3P0CJ86 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L5P0CJ88 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L6P0CJ89 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L7P0CJ90 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ACKR3P25106 362 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 EEF1DP29692 281 aaKnown RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 PSMB10P40306 273 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 STAT2P52630 851 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 MAP2K1Q02750 393 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ZIC1Q15915 447 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 FAM174BQ3ZCQ3 159 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 IQCCQ4KMZ1 466 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 KLHL10Q6JEL2 608 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4L9Q6RFH8 374 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 APOOLQ6UXV4 268 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 Q6ZR03 302 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 SLFN11Q7Z7L1 901 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 CROCCP3Q8IVE0 287 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 C9orf40Q8IXQ3 194 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ZNF100Q8IYN0 542 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ALLCQ8N6M5 410 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 PTERQ96BW5 349 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ZNF274Q96GC6 653 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 LRRC3BQ96PB8 259 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 SPAG8Q99932 426 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 PELOQ9BRX2 385 aaKnown RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 HCAR1Q9BXC0 346 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 SNX25Q9H3E2 840 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 XAB2Q9HCS7 855 aaKnown RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 ORC3Q9UBD5 711 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 DUX4Q9UBX2 424 aa-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 RPH3AQ9Y2J0 694 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40-201ENST00000388090 A0A1W2PQ09 198 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 C11orf94C9JXX5 98 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 PTGES3LE9PB15 166 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 MSH4O15457 936 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 LCMT2O60294 686 aaKnown RBP-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 PRAF2O60831 178 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 NOL4O94818 638 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 ERCC2P18074 760 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 SRD5A2P31213 254 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 UGT1A5P35504 534 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 SETQ01105 290 aaPredicted RBP-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 PRB3Q04118 309 aaPredicted RBP-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 CCDC57Q2TAC2 916 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 CMPK2Q5EBM0 449 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 HYIQ5T013 277 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 ZNF880Q6PDB4 577 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 ARSKQ6UWY0 536 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 CXCL17Q6UXB2 119 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 FRA10AC1Q70Z53 315 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 TLK2Q86UE8 772 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 PPP1R27Q86WC6 154 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 ANKRD49Q8WVL7 239 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 NEIL2Q969S2 332 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 TMCO6Q96DC7 493 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 CEP170P1Q96L14 293 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 ERGIC2Q96RQ1 377 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 NACAP1Q9BZK3 213 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 MTIF3Q9H2K0 278 aaKnown RBP-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 VIPAS39Q9H9C1 493 aa-0.2□□□□□ -2.44
SNORA40-201ENST00000388090 Q9HAA7 133 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms