RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 OR4L1Q8NH43 312 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF354BQ96LW1 612 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 LMAN2LQ9H0V9 348 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CWH43Q9H720 699 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OSGIN1Q9UJX0 560 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 A0A1W2PPW3 197 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RHOQP17081 205 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DLSTP36957 453 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 HCCSP53701 268 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CDK3Q00526 305 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TMEM115Q12893 351 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NPRL3Q12980 569 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MTAPQ13126 283 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAHD2BQ6P2I3 314 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CERS5Q8N5B7 392 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF565Q8N9K5 539 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RAB39BQ96DA2 213 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAHD2AQ96GK7 314 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 BCO1Q9HAY6 547 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 STRAPQ9Y3F4 350 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 A0A1W2PPL8 197 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OR2AG2A6NM03 316 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MUSKO15146 869 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SGCEO43556 437 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TRBC1P01850 177 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PDGFAP04085 211 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GIMD1P0DJR0 217 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 BMXP51813 675 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CDH15P55291 814 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NKX6-1P78426 367 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CLCQ05315 142 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TAF10Q12962 218 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DCAF12L1Q5VU92 463 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DAW1Q8N136 415 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PNLDC1Q8NA58 520 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DBF4BQ8NFT6 615 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RNF128Q8TEB7 428 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 LCN9Q8WX39 176 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ATOH1Q92858 354 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SIPA1Q96FS4 1042 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TMPRSS13Q9BYE2 586 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 BTNL2Q9UIR0 455 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PACSIN3Q9UKS6 424 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 V9GYS6 101 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MYO7BQ6PIF6 2116 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TMEM265A0A087WTH1 108 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 LINC00862A6NCI5 91 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 HMSDA8MTL9 139 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 IRAK2O43187 625 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OIP5O43482 229 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PPM1BO75688 479 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PLGP00747 810 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MTNR1BP49286 362 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PLGLB1Q02325 96 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MINDY4Q4G0A6 757 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CYBRD1Q53TN4 286 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZMAT1Q5H9K5 638 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 BEND4Q6ZU67 534 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 EIF4E3Q8N5X7 224 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SHKBP1Q8TBC3 707 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ASF1AQ9Y294 204 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 UBIAD1Q9Y5Z9 338 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GPR89AB7ZAQ6 455 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NPC1O15118 1278 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PDYNP01213 254 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RAF1P04049 648 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GPR89BP0CG08 455 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FMO4P31512 558 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RHBDL3P58872 404 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 AIMP2Q13155 320 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF345Q14585 488 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PPA1Q15181 289 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GXYLT1Q4G148 440 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAM205BPQ63HN1 556 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OVCH2Q7RTZ1 564 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C12orf40Q86WS4 652 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 HPSE2Q8WWQ2 592 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RBM18Q96H35 190 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TXN2Q99757 166 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 XYLT2Q9H1B5 865 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MAGEH1Q9H213 219 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ASB8Q9H765 288 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SLC2A9Q9NRM0 540 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CUEDC1Q9NWM3 386 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TRDV1A0A1B0GX56 115 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PQLC2LA1A4F0 135 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MAT2AP31153 395 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SLC26A5P58743 744 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SLC25A11Q02978 314 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 IL10RBQ08334 325 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PMS2P3Q13401 168 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MAPK14Q16539 360 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FUT11Q495W5 492 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PRICKLE2Q7Z3G6 844 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SLC9B2Q86UD5 537 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OVCA2Q8WZ82 227 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PKP2Q99959 881 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C17orf62Q9BQA9 187 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CARS2Q9HA77 564 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms