RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MLC1Q15049 377 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 GSTA3Q16772 222 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 C6orf163Q5TEZ5 329 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 RNF111Q6ZNA4 994 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 C9orf40Q8IXQ3 194 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 CIDECQ96AQ7 238 aaPredicted RBP17.4■□□□□ 0.38
SSU72-203ENST00000378725 DPY30Q9C005 99 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 OR10A5Q9H207 317 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 EPS8L2Q9H6S3 715 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 TCF7L2Q9NQB0 619 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 ATAD3AQ9NVI7 634 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 MYOTQ9UBF9 498 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 UBDO15205 165 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 PLOD3O60568 738 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 BCAS2O75934 225 aaPredicted RBP17.39■□□□□ 0.37
SSU72-203ENST00000378725 CBX7O95931 251 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 IDO1P14902 403 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 DUSP8Q13202 625 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 FHL5Q5TD97 284 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 TMEM198Q66K66 360 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 BEST3Q8N1M1 668 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 ZADH2Q8N4Q0 377 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 RBMXL3Q8N7X1 1067 aaKnown RBP17.39■□□□□ 0.37
SSU72-203ENST00000378725 RFWD2Q8NHY2 731 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 KAT2AQ92830 837 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 TESCQ96BS2 214 aa17.39■□□□□ 0.37
SSU72-203ENST00000378725 ZBED6CLQ96FA7 236 aaPredicted RBP17.39■□□□□ 0.37
SSU72-203ENST00000378725 ZNF317Q96PQ6 595 aaPredicted RBP17.39■□□□□ 0.37
SSU72-203ENST00000378725 BHLHE41Q9C0J9 482 aaPredicted RBP17.39■□□□□ 0.37
SSU72-203ENST00000378725 CACNA1GO43497 2377 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 A0A087WV62 115 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 POLR3GO15318 223 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 WDPCPO95876 746 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 VIMP08670 466 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 TRHRP34981 398 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 CD97P48960 835 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 MRPL19P49406 292 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 CLNS1AP54105 237 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 MANFP55145 182 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 UFM1P61960 85 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 MRPS35P82673 323 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 SRSF11Q05519 484 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 EBPQ15125 230 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 PDCD4Q53EL6 469 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 ZNF551Q7Z340 670 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 SIMC1Q8NDZ2 872 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 OR7G2Q8NG99 324 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 OR8J2Q8NGG1 315 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 ZFP28Q8NHY6 868 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 THAP3Q8WTV1 239 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 ELP4Q96EB1 424 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 TEX37Q96LM6 180 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 DUSP26Q9BV47 211 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 TRIM45Q9H8W5 580 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 LIN28AQ9H9Z2 209 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 NPHS2Q9NP85 383 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 SDR39U1Q9NRG7 319 aaPredicted RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 RYDENQ9NUL5 291 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 FAM53CQ9NYF3 392 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 PLA2G3Q9NZ20 509 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 ABI3Q9P2A4 366 aa17.38■□□□□ 0.37
SSU72-203ENST00000378725 YARS2Q9Y2Z4 477 aaKnown RBP17.38■□□□□ 0.37
SSU72-203ENST00000378725 DYTNA2CJ06 578 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 FCHO1O14526 889 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 EMDP50402 254 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 EXOSC7Q15024 291 aaKnown RBP17.37■□□□□ 0.37
SSU72-203ENST00000378725 PIGGQ5H8A4 983 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 Q6ZS92 163 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 SLC29A4Q7RTT9 530 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 OR2L13Q8N349 312 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 ZNF441Q8N8Z8 693 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 OR52R1Q8NGF1 315 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 C16orf52Q8NHV5 167 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 ADIPOR1Q96A54 375 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 TP53INP1Q96A56 240 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 THOC1Q96FV9 657 aaKnown RBP17.37■□□□□ 0.37
SSU72-203ENST00000378725 WWTR1Q9GZV5 400 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 C19orf53Q9UNZ5 99 aaPredicted RBP17.37■□□□□ 0.37
SSU72-203ENST00000378725 CFL2Q9Y281 166 aa17.37■□□□□ 0.37
SSU72-203ENST00000378725 DOCK10Q96BY6 2186 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 A0A1W2PRB8 838 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 WWP2O00308 870 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 SCN2BO60939 215 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 ITGA10O75578 1167 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 OR2J2O76002 312 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 IL12AP29459 219 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 CD96P40200 585 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 WNT3P56703 355 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 PHC1P78364 1004 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 IRX1P78414 480 aaPredicted RBP17.36■□□□□ 0.37
SSU72-203ENST00000378725 TUBA3CQ13748 450 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 RPS6KA2Q15349 733 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 DPY19L1Q2PZI1 675 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 PGS1Q32NB8 556 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 CGB2Q6NT52 195 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 TUBA3EQ6PEY2 450 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 TMEM107Q6UX40 140 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms