RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DNAJC1Q96KC8 554 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 IGLV3-16A0A075B6K0 115 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PMS2P3Q13401 168 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 RIMKLAQ8IXN7 391 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SPIN2AQ99865 258 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SPIN2BQ9BPZ2 258 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TIMM29Q9BSF4 260 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MSX1P28360 303 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 EIF3IQ13347 325 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MAPK14Q16539 360 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 FCRL6Q6DN72 434 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 FGFBP2Q9BYJ0 223 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 NSUN3Q9H649 340 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 EGFL7Q9UHF1 273 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SLC5A11Q8WWX8 675 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 KATNBL1Q9H079 304 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHAC1Q9H158 963 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ABCG5Q9H222 651 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GPATCH2LQ9NWQ4 482 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 RDH8Q9NYR8 311 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 C5AR1P21730 350 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LHCGRP22888 699 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 EVI2BP34910 448 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TM4SF4P48230 202 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DSC1Q08554 894 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 IL18Q14116 193 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SYT14Q8NB59 555 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DDX31Q9H8H2 851 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SCAMP2O15127 329 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 HIST1H1TP22492 207 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR8H1Q8NGG4 311 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 INTS12Q96CB8 462 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 APOLD1Q96LR9 279 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LCTLQ6UWM7 567 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 KLHL9Q9P2J3 617 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CYTH4Q9UIA0 394 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TMPRSS11EQ9UL52 423 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MAP2P11137 1827 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR6C70A6NIJ9 312 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 S100A8P05109 93 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GIPP09681 153 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LAPTM4AQ15012 233 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ENPP7Q6UWV6 458 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 C6orf120Q7Z4R8 191 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DTWD2Q8NBA8 298 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF548Q8NEK5 533 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LMF2Q9BU23 707 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 FBXO9Q9UK97 447 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ANKRD26Q9UPS8 1709 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 S1PR1P21453 382 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SSR2P43308 183 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R38P59533 333 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SLC35F3Q8IY50 421 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MARVELD1Q9BSK0 173 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LHPPQ9H008 270 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 BLOC1S5-TXNDC5H3BN57 136 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 RNF148Q8N7C7 305 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR5W2Q8NH69 310 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ARL5BQ96KC2 179 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D15Q8TC07 691 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ASH2LQ9UBL3 628 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 UBFD1O14562 309 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TNFRSF4P43489 277 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GLO1Q04760 184 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LCN9Q8WX39 176 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SGTBQ96EQ0 304 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TNKS2Q9H2K2 1166 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DPEP3Q9H4B8 488 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF385DQ9H6B1 395 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR10H1Q9Y4A9 318 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR10H2O60403 315 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 RFX2P48378 723 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CLCNKBP51801 687 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DIO3P55073 304 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 THAP7Q9BT49 309 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 AMD1P17707 334 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR3A3P47888 321 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OR3A2P47893 321 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MZT1Q08AG7 82 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 FAPQ12884 760 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SLC9B2Q86UD5 537 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 HTRA1Q92743 480 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MED8Q96G25 268 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 C8orf33Q9H7E9 229 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 HMX2A2RU54 273 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CHRM5P08912 532 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 UCHL1P09936 223 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PSKH1P11801 424 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PRSS3P35030 304 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF140P52738 457 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 KCT2Q8NC54 265 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ANKK1Q8NFD2 765 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 POLD4Q9HCU8 107 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ABCB9Q9NP78 766 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 OSGIN1Q9UJX0 560 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PADI1Q9ULC6 663 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SOCS2O14508 198 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CPEP16870 476 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms