RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PRPF38BQ5VTL8 546 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 DAZLQ92904 295 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 PELOQ9BRX2 385 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 CDADC1Q9BWV3 514 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 TEX10Q9NXF1 929 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 SBF1O95248 1867 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 CABIN1Q9Y6J0 2220 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 H0YGG7 62 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 M0R3H8 397 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 HAT1O14929 419 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 PGRMC2O15173 223 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 KLHL18O94889 574 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 HEXBP07686 556 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 ARF3P61204 181 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 COX10Q12887 443 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 GPR18Q14330 331 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 NUP54Q7Z3B4 507 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 G6PC3Q9BUM1 346 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 C1QTNF2Q9BXJ5 285 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 NAALAD2Q9Y3Q0 740 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 HYKKA2RU49 373 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 FURINP09958 794 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 DUSP3P51452 185 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CRISP1P54107 249 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CBLBQ13191 982 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PIN1Q13526 163 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF550Q7Z398 422 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 OR4K5Q8NGD3 323 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MOSPD2Q8NHP6 518 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PLCL2Q9UPR0 1127 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 AK1P00568 194 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF3P17036 446 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MAZP56270 477 aaKnown RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 FRRS1Q6ZNA5 592 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CHTF18Q8WVB6 975 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 OSTF1Q92882 214 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF597Q96LX8 424 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MS4A4EQ96PG1 132 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ANKRD60Q9BZ19 345 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MTHFD2LQ9H903 347 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 TNFRSF10DQ9UBN6 386 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM5Q9Y2B1 443 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 RLFQ13129 1914 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 UGT2B7P16662 529 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MYF6P23409 242 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 REEP5Q00765 189 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 NSDHLQ15738 373 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 AGBL4Q5VU57 503 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 KIAA1211LQ6NV74 962 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 RNF111Q6ZNA4 994 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 OR51A7Q8NH64 312 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 SMPDL3BQ92485 455 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 UFD1Q92890 307 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 MSANTD3Q96H12 275 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 C14orf105Q9NVL8 296 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ADAM29Q9UKF5 820 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 INMTO95050 263 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PPP2CBP62714 309 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PPP2CAP67775 309 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ST3GAL4Q11206 333 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 LPAL2Q16609 132 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PYDC2Q56P42 97 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 CBLL1Q75N03 491 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ERI1Q8IV48 349 aaKnown RBP13.73□□□□□ -0.21
TCOF1-202ENST00000377797 ALOXE3Q9BYJ1 711 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 PLA2G2FQ9BZM2 168 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
TCOF1-202ENST00000377797 SOX30O94993 753 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 TCF3P15923 654 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM151AQ8N4L1 468 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 THAP3Q8WTV1 239 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 C12orf43Q96C57 262 aaKnown RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 CRELD1Q96HD1 420 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 MARCH7Q9H992 704 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 KLRF1Q9NZS2 232 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 BLOC1S5-TXNDC5H3BN57 136 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 FUT4P22083 530 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 HLCSP50747 726 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 CD47Q08722 323 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM156Q8N614 296 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF433Q8N7K0 673 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 CDRT4Q8N9R6 151 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM203Q969S6 136 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ITPAQ9BY32 194 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 PTPRFP10586 1907 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 SLC22A1O15245 554 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms