RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ESRRAP11474 423 aaPredicted RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 DDX5P17844 614 aaKnown RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 DDCP20711 480 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 NR0B1P51843 470 aaKnown RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 DCAF7P61962 342 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 TBCELQ5QJ74 424 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 RNF165Q6ZSG1 346 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 IKBIPQ70UQ0 350 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 FJX1Q86VR8 437 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 SPPL2CQ8IUH8 684 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 NUDCD3Q8IVD9 361 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 OR2M7Q8NG81 312 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 RELTQ969Z4 430 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 EXOSC8Q96B26 276 aaKnown RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 C11orf24Q96F05 449 aaPredicted RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 BBS4Q96RK4 519 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 LRTM1Q9HBL6 345 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 SLC35C2Q9NQQ7 365 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 TMED5Q9Y3A6 229 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 TRAF6Q9Y4K3 522 aa20.42■□□□□ 0.86
SRM-201ENST00000376957 SPENQ96T58 3664 aaKnown RBP20.42■□□□□ 0.86
SRM-201ENST00000376957 FLNCQ14315 2725 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 PRRG2O14669 202 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 TM9SF1O15321 606 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 LDLRP01130 860 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 FBXO45P0C2W1 286 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 GP1BBP13224 206 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 PRPH2P23942 346 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 ZNF791Q3KP31 576 aaPredicted RBP20.41■□□□□ 0.86
SRM-201ENST00000376957 ARL13AQ5H913 290 aaPredicted RBP20.41■□□□□ 0.86
SRM-201ENST00000376957 C1QL3Q5VWW1 255 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 NOXRED1Q6NXP6 359 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 DDIASQ8IXT1 998 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 CCDC116Q8IYX3 515 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 ZNF615Q8N8J6 731 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 CNRIP1Q96F85 164 aaPredicted RBP20.41■□□□□ 0.86
SRM-201ENST00000376957 CCT7Q99832 543 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 MECRQ9BV79 373 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 MYNNQ9NPC7 610 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 MAT2BQ9NZL9 334 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 HEY2Q9UBP5 337 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 BOKQ9UMX3 212 aaPredicted RBP20.41■□□□□ 0.86
SRM-201ENST00000376957 NPFFR2Q9Y5X5 522 aa20.41■□□□□ 0.86
SRM-201ENST00000376957 A0A1W2PS29 197 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 WIPF3A6NGB9 483 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 CCL21O00585 134 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 TYROBPO43914 113 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 SLITRK5O94991 958 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 SNUPNO95149 360 aaKnown RBP20.4■□□□□ 0.86
SRM-201ENST00000376957 BPGMP07738 259 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 CT62P0C5K7 136 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 PPIAP62937 165 aaKnown RBP20.4■□□□□ 0.86
SRM-201ENST00000376957 KCNJ2P63252 427 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 PSPHP78330 225 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 KANK2Q63ZY3 851 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 SIAH3Q8IW03 269 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 FAM9CQ8IZT9 166 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 MMP21Q8N119 569 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 ZNF675Q8TD23 568 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 ZNF681Q96N22 645 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 IL1RL2Q9HB29 575 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 POLR3HQ9Y535 204 aaPredicted RBP20.4■□□□□ 0.86
SRM-201ENST00000376957 ACTL7BQ9Y614 415 aa20.4■□□□□ 0.86
SRM-201ENST00000376957 CROCCQ5TZA2 2017 aa20.39■□□□□ 0.86
SRM-201ENST00000376957 NPIPB8E9PQR5 432 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 ACOX3O15254 700 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 HS6ST1O60243 411 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 CDC40O60508 579 aaKnown RBP eCLIP20.39■□□□□ 0.85
SRM-201ENST00000376957 ZWINTO95229 277 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 NAGAP17050 411 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 MAPK1P28482 360 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 NTSP30990 170 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 RFC3P40938 356 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 CA7P43166 264 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 SH2D4BQ5SQS7 431 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 ARHGAP11AQ6P4F7 1023 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 FAM111BQ6SJ93 734 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 LRIG3Q6UXM1 1119 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 KIRREL3Q8IZU9 778 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 ADCY4Q8NFM4 1077 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 PAQR8Q8TEZ7 354 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 CTHRC1Q96CG8 243 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 HSPBAP1Q96EW2 488 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 SECISBP2Q96T21 854 aaKnown RBP20.39■□□□□ 0.85
SRM-201ENST00000376957 B4GALT7Q9UBV7 327 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 DNAJC15Q9Y5T4 150 aa20.39■□□□□ 0.85
SRM-201ENST00000376957 POLEQ07864 2286 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TMEM114B3SHH9 223 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 BIRC5O15392 142 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 NADKO95544 446 aaPredicted RBP20.38■□□□□ 0.85
SRM-201ENST00000376957 CLPSP04118 112 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 LINC00032P0C843 101 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 RPS6KA2Q15349 733 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 NTRK2Q16620 822 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TICAM1Q8IUC6 712 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 FBXW8Q8N3Y1 598 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 ZNF441Q8N8Z8 693 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 OR52R1Q8NGF1 315 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TWIST2Q8WVJ9 160 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 PGM2Q96G03 612 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms