RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 BEX2Q9BXY8 128 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 OR51I1Q9H343 314 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
ACTN1-202ENST00000376839 TMEM98Q9Y2Y6 226 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 C5orf42Q9H799 3197 aa12.5□□□□□ -0.41
ACTN1-202ENST00000376839 A0A1W2PRQ8 180 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 HMX3A6NHT5 357 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 C6P13671 934 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 CD79BP40259 229 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 FRKP42685 505 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ASAH1Q13510 395 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ZNF77Q15935 545 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 C17orf64Q86WR6 236 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 CAMKK1Q8N5S9 505 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 OR6T1Q8NGN1 323 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ZSWIM3Q96MP5 696 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 MCOLN1Q9GZU1 580 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 SLC22A4Q9H015 551 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 DPEP2Q9H4A9 486 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 EGLN3Q9H6Z9 239 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 TRPC4Q9UBN4 977 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 GPR52Q9Y2T5 361 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 GOLGA4Q13439 2230 aaKnown RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 H7BY64 318 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 TMCC2O75069 709 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 NTN1O95631 604 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 CXCL14O95715 111 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 TSPAN19P0C672 248 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ALDH6A1Q02252 535 aaKnown RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 CDK10Q15131 360 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 LSRQ86X29 649 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 KIF18BQ86Y91 864 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ZFP41Q8N8Y5 198 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 GATAD2BQ8WXI9 593 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ARRDC3Q96B67 414 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 PRAP1Q96NZ9 151 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 FNDC11Q9BVV2 318 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 NDEL1Q9GZM8 345 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 RHBGQ9H310 441 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 ZSCAN32Q9NX65 697 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 PAQR5Q9NXK6 330 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-202ENST00000376839 P2RX2Q9UBL9 471 aa12.49□□□□□ -0.41
ACTN1-202ENST00000376839 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 B4DXG7 233 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 GUCY1B2O75343 617 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 LGI1O95970 557 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 NR2F1P10589 423 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 DDX5P17844 614 aaKnown RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SMIM11AP58511 58 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 NTHL1P78549 312 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 EFNB1P98172 346 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 BNC1Q01954 994 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SNAPC1Q16533 368 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 TCEAL5Q5H9L2 206 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 CLDN22Q8N7P3 220 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 MORN4Q8NDC4 146 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SLC7A6Q92536 515 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 ZBED6CLQ96FA7 236 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 PPP1R16AQ96I34 528 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 LINC00615Q96LM1 132 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 YIPF4Q9BSR8 244 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 KATNB1Q9BVA0 655 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SLC23A2Q9UGH3 650 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SNX7Q9UNH6 387 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 PLA2G10O15496 165 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 TBX19O60806 448 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 KELP23276 732 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 GPC1P35052 558 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 RPS5P46782 204 aaKnown RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SLC9A3P48764 834 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 WNT4P56705 351 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 CDK5Q00535 292 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 PYDC2Q56P42 97 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 PDZK1Q5T2W1 519 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 LAPTM4BQ86VI4 370 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 OR52P1PQ8NH57 321 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 RNF170Q96K19 258 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SLC35G5Q96KT7 338 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms