RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF566Q969W8 418 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZNF354BQ96LW1 612 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HSPA12BQ96MM6 686 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 COL21A1Q96P44 957 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SPATA5L1Q9BVQ7 753 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 RSPO3Q9BXY4 272 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ACER3Q9NUN7 267 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NDRG4Q9ULP0 352 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 EIF2S1P05198 315 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CRHBPP24387 322 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MAOBP27338 520 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PTGER1P34995 402 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 XKP51811 444 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PRKAG1P54619 331 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HNRNPKP61978 463 aaKnown RBP eCLIP16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 EXOC3L2Q2M3D2 409 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CYP27C1Q4G0S4 372 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZNF773Q6PK81 442 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ARHGEF39Q8N4T4 335 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MAGED4Q96JG8 741 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR7D2Q96RA2 312 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TSC22D3Q99576 134 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IL21RQ9HBE5 538 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SEC14L3Q9UDX4 400 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 BLOC1S6Q9UL45 172 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DOLKQ9UPQ8 538 aa16.92■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MUC3AQ02505 3323 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 A0A0G2JPF8 293 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HNRNPCL2B2RXH8 293 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HNRNPCL3B7ZW38 293 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 J3KTA2 159 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CHRM4P08173 479 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HNRNPCL4P0DMR1 293 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IL7RP16871 459 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CDH3P22223 829 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 VSX2P58304 361 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 RAPSNQ13702 412 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LTB4RQ15722 352 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LAIR2Q6ISS4 152 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OGFOD3Q6PK18 319 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DNASE2BQ8WZ79 361 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DHRS1Q96LJ7 313 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MS4A4EQ96PG1 132 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 APOL4Q9BPW4 351 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CCDC3Q9BQI4 270 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ACTRT3Q9BYD9 372 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 FAM60AQ9NP50 221 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LIPT1Q9Y234 373 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LMO7DNF2Z398 122 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 K7ESF4 209 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 AQP9O43315 295 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DNAJB6O75190 326 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLITRK5O94991 958 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PROS1P07225 676 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CCDC159P0C7I6 412 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CPMP14384 443 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PAX7P23759 505 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 YAP1P46937 504 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SIM1P81133 766 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NPRL3Q12980 569 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MEP1AQ16819 746 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PRSS41Q7RTY9 318 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CA13Q8N1Q1 262 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR2L13Q8N349 312 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLC5A8Q8N695 610 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C16orf58Q96GQ5 468 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 FEVQ99581 238 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MIR1-1HGQ9H1L0 117 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TMEM74BQ9NUR3 256 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CALML5Q9NZT1 146 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PTGFRNQ9P2B2 879 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ACAD8Q9UKU7 415 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 POFUT2Q9Y2G5 429 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NAALAD2Q9Y3Q0 740 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GMPPBQ9Y5P6 360 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CEPT1Q9Y6K0 416 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DSPPQ9NZW4 1301 aa16.91■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PCDH15Q96QU1 1955 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZNF860A6NHJ4 632 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CYR61O00622 381 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CASC3O15234 703 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GADD45GO95257 159 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PORP16435 677 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ESRRGP62508 458 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OLR1P78380 273 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IL1RL1Q01638 556 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PRTGQ2VWP7 1150 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TSPYL5Q86VY4 417 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DNAJC22Q8N4W6 341 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KAT2AQ92830 837 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HRASLS5Q96KN8 279 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TRNT1Q96Q11 434 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 YIPF4Q9BSR8 244 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IER2Q9BTL4 223 aa16.9■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PAPOLBQ9NRJ5 636 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms