RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 C22orf42Q6IC83 251 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ACTL8Q9H568 366 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ACTR3BQ9P1U1 418 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 DLGAP4Q9Y2H0 992 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 TMED5Q9Y3A6 229 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 GSRP00390 522 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 IL3P08700 152 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PRSS56P0CW18 603 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MYOGP15173 224 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 AOC1P19801 751 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF84P51523 738 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ELAVL3Q14576 367 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PPA1Q15181 289 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 SULT4A1Q9BR01 284 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF442Q9H7R0 627 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 FNIP2Q9P278 1114 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 UBE2J1Q9Y385 318 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 FAM159BA6NKW6 160 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF623O75123 536 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 OR2B3O76000 313 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ERMP1Q7Z2K6 904 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 KBTBD6Q86V97 674 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 BEST3Q8N1M1 668 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 AURKBQ96GD4 344 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MRGPRX2Q96LB1 330 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 SRA1Q9HD15 236 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PSAT1Q9Y617 370 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 HMX3A6NHT5 357 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 FRKP42685 505 aaPredicted RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 WDTC1Q8N5D0 677 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 TRAM1L1Q8N609 369 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SCRN2Q96FV2 425 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ACSL5Q9ULC5 683 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 UNC119BA6NIH7 251 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 IL7P13232 177 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 EPHA1P21709 976 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 OXTRP30559 389 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CLDN2P57739 230 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 HSD11B2P80365 405 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF630Q2M218 657 aaPredicted RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 Q8N402 240 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SLC29A3Q9BZD2 475 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 DNTTIP1Q9H147 329 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF175Q9Y473 711 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 TM4SF4P48230 202 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SRYQ05066 204 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 LHFPL3Q86UP9 236 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 OR4N5Q8IXE1 308 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ISOC1Q96CN7 298 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 FCRL3Q96P31 734 aaPredicted RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 MGAT4BQ9UQ53 548 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 LCKP06239 509 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 RPL35P42766 123 aaKnown RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CRISP1P54107 249 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 RAB33AQ14088 237 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 PSAPL1Q6NUJ1 521 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 EPGNQ6UW88 154 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ASPGQ86U10 573 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 OR56A3Q8NH54 315 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 MYLIPQ8WY64 445 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SLC2A13Q96QE2 648 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SECISBP2Q96T21 854 aaKnown RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CD93Q9NPY3 652 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 GOSR2O14653 212 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SOCS5O75159 536 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 RFPL1O75677 317 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CAPN3P20807 821 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 HHEXQ03014 270 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CARM1Q86X55 608 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 ZFP41Q8N8Y5 198 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 HEBP1Q9NRV9 189 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 FAM120CQ9NX05 1096 aaKnown RBP13.67□□□□□ -0.22
TRAF1-201ENST00000373887 LRFN1Q9P244 771 aa13.67□□□□□ -0.22
TRAF1-201ENST00000373887 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 A0A0G2JMP0 313 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PCDH17O14917 1159 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ADAP00813 363 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 MOGSQ13724 837 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PLGLAQ15195 96 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 FAM205BPQ63HN1 556 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 GID4Q8IVV7 300 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 OR4M2Q8NGB6 313 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 OR51A7Q8NH64 312 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 DNMT3AQ9Y6K1 912 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms