RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LSAMPQ13449 338 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 TMEFF1Q8IYR6 380 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 SPARTQ8N0X7 666 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 BPIFB6Q8NFQ5 453 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 OR4D11Q8NGI4 311 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 RASSF5Q8WWW0 418 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 HRASLS5Q96KN8 279 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 NIPSNAP1Q9BPW8 284 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 WFDC6Q9BQY6 131 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 CHRDQ9H2X0 955 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 CXorf21Q9HAI6 301 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 C3orf14Q9HBI5 128 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 POMT2Q9UKY4 750 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 SLC22A7Q9Y694 548 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 A8MVJ9 347 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 ZSCAN9O15535 394 aaPredicted RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 XPNPEP2O43895 674 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF10P21506 573 aaPredicted RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 MAOBP27338 520 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 CD38P28907 300 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 FMO3P31513 532 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 MAZP56270 477 aaKnown RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 PIGFQ07326 219 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 LEXMQ3ZCV2 418 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 XAF1Q6GPH4 301 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 GPR153Q6NV75 609 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 B3GNT8Q7Z7M8 397 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 COMTD1Q86VU5 262 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 KRT73Q86Y46 540 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 CLVS1Q8IUQ0 354 aaPredicted RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 LRRC25Q8N386 305 aaPredicted RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 BBS10Q8TAM1 723 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 PHF10Q8WUB8 498 aaKnown RBP18.42■□□□□ 0.54
HDAC1-201ENST00000373548 OR7D2Q96RA2 312 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 PSD2Q9BQI7 771 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 EQTNQ9NQ60 294 aa18.42■□□□□ 0.54
HDAC1-201ENST00000373548 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 HCRTR1O43613 425 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 CSF2P04141 144 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 PCSK6P29122 969 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 MAN2A2P49641 1150 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 XKP51811 444 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 STARD6P59095 220 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 MAD2L1BPQ15013 274 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 TCTN3Q6NUS6 607 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 Q6ZPB1 254 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 RBM45Q8IUH3 476 aaKnown RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 LACC1Q8IV20 430 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 OR4N5Q8IXE1 308 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 SHISA5Q8N114 240 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 OR4K14Q8NGD5 310 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 VANGL1Q8TAA9 524 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 UBE2FQ969M7 185 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 GIMAP5Q96F15 307 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 FANCEQ9HB96 536 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 MS4A12Q9NXJ0 267 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 POFUT2Q9Y2G5 429 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 HCN4Q9Y3Q4 1203 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 NME6O75414 186 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 CCNB2O95067 398 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 NME1P15531 152 aaKnown RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 ST6GAL1P15907 406 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 TLX1P31314 330 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 TTKP33981 857 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 MLLT1Q03111 559 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-201ENST00000373548 ARMC6Q6NXE6 501 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 CSNK1A1LQ8N752 337 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 OR7G2Q8NG99 324 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 MPP4Q96JB8 637 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 ALPK1Q96QP1 1244 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 TUBA1CQ9BQE3 449 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 LYRM4Q9HD34 91 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 FAM60AQ9NP50 221 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 CDC14AQ9UNH5 594 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 NAALAD2Q9Y3Q0 740 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 PCDHGA6Q9Y5G7 932 aa18.41■□□□□ 0.54
HDAC1-201ENST00000373548 PTGES3LE9PB15 166 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 CBLP22681 906 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 VSX2P58304 361 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 FOXD4Q12950 439 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 GNA13Q14344 377 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 COLEC12Q5KU26 742 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 MANEAQ5SRI9 462 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 FAM111BQ6SJ93 734 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 HMGN2P46Q86SG4 172 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ALDH16A1Q8IZ83 802 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 SAMD14Q8IZD0 417 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF655Q8N720 491 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ISOC1Q96CN7 298 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 SEMA6CQ9H3T2 930 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 NMNAT1Q9HAN9 279 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 VCX3AQ9NNX9 186 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 PRDM9Q9NQV7 894 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-201ENST00000373548 TMEM131Q92545 1883 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ARRDC5A6NEK1 342 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 NUP107P57740 925 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 CXCR4P61073 352 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 ELOCQ15369 112 aa18.4■□□□□ 0.54
HDAC1-201ENST00000373548 GPAT3Q53EU6 434 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms